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A deep neural network framework to derive interpretable decision rules for accurate traumatic brain injury identification of infants
OBJECTIVE: We aimed to develop a robust framework to model the complex association between clinical features and traumatic brain injury (TBI) risk in children under age two, and identify significant features to derive clinical decision rules for triage decisions. METHODS: In this retrospective study...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10080782/ https://www.ncbi.nlm.nih.gov/pubmed/37024858 http://dx.doi.org/10.1186/s12911-023-02155-x |
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author | Zou, Baiming Mi, Xinlei Stone, Elizabeth Zou, Fei |
author_facet | Zou, Baiming Mi, Xinlei Stone, Elizabeth Zou, Fei |
author_sort | Zou, Baiming |
collection | PubMed |
description | OBJECTIVE: We aimed to develop a robust framework to model the complex association between clinical features and traumatic brain injury (TBI) risk in children under age two, and identify significant features to derive clinical decision rules for triage decisions. METHODS: In this retrospective study, four frequently used machine learning models, i.e., support vector machine (SVM), random forest (RF), deep neural network (DNN), and XGBoost (XGB), were compared to identify significant clinical features from 24 input features associated with the TBI risk in children under age two under the permutation feature importance test (PermFIT) framework by using the publicly available data set from the Pediatric Emergency Care Applied Research Network (PECARN) study. The prediction accuracy was determined by comparing the predicted TBI status with the computed tomography (CT) scan results since CT scan is the gold standard for diagnosing TBI. RESULTS: At a significance level of [Formula: see text] , DNN, RF, XGB, and SVM identified 9, 1, 2, and 4 significant features, respectively. In a comparison of accuracy (Accuracy), the area under the curve (AUC), and the precision-recall area under the curve (PR-AUC), the permutation feature importance test for DNN model was the most powerful framework for identifying significant features and outperformed other methods, i.e., RF, XGB, and SVM, with Accuracy, AUC, and PR-AUC as 0.915, 0.794, and 0.974, respectively. CONCLUSION: These results indicate that the PermFIT-DNN framework robustly identifies significant clinical features associated with TBI status and improves prediction performance. The findings could be used to inform the development of clinical decision tools designed to inform triage decisions. |
format | Online Article Text |
id | pubmed-10080782 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-100807822023-04-08 A deep neural network framework to derive interpretable decision rules for accurate traumatic brain injury identification of infants Zou, Baiming Mi, Xinlei Stone, Elizabeth Zou, Fei BMC Med Inform Decis Mak Research OBJECTIVE: We aimed to develop a robust framework to model the complex association between clinical features and traumatic brain injury (TBI) risk in children under age two, and identify significant features to derive clinical decision rules for triage decisions. METHODS: In this retrospective study, four frequently used machine learning models, i.e., support vector machine (SVM), random forest (RF), deep neural network (DNN), and XGBoost (XGB), were compared to identify significant clinical features from 24 input features associated with the TBI risk in children under age two under the permutation feature importance test (PermFIT) framework by using the publicly available data set from the Pediatric Emergency Care Applied Research Network (PECARN) study. The prediction accuracy was determined by comparing the predicted TBI status with the computed tomography (CT) scan results since CT scan is the gold standard for diagnosing TBI. RESULTS: At a significance level of [Formula: see text] , DNN, RF, XGB, and SVM identified 9, 1, 2, and 4 significant features, respectively. In a comparison of accuracy (Accuracy), the area under the curve (AUC), and the precision-recall area under the curve (PR-AUC), the permutation feature importance test for DNN model was the most powerful framework for identifying significant features and outperformed other methods, i.e., RF, XGB, and SVM, with Accuracy, AUC, and PR-AUC as 0.915, 0.794, and 0.974, respectively. CONCLUSION: These results indicate that the PermFIT-DNN framework robustly identifies significant clinical features associated with TBI status and improves prediction performance. The findings could be used to inform the development of clinical decision tools designed to inform triage decisions. BioMed Central 2023-04-06 /pmc/articles/PMC10080782/ /pubmed/37024858 http://dx.doi.org/10.1186/s12911-023-02155-x Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Zou, Baiming Mi, Xinlei Stone, Elizabeth Zou, Fei A deep neural network framework to derive interpretable decision rules for accurate traumatic brain injury identification of infants |
title | A deep neural network framework to derive interpretable decision rules for accurate traumatic brain injury identification of infants |
title_full | A deep neural network framework to derive interpretable decision rules for accurate traumatic brain injury identification of infants |
title_fullStr | A deep neural network framework to derive interpretable decision rules for accurate traumatic brain injury identification of infants |
title_full_unstemmed | A deep neural network framework to derive interpretable decision rules for accurate traumatic brain injury identification of infants |
title_short | A deep neural network framework to derive interpretable decision rules for accurate traumatic brain injury identification of infants |
title_sort | deep neural network framework to derive interpretable decision rules for accurate traumatic brain injury identification of infants |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10080782/ https://www.ncbi.nlm.nih.gov/pubmed/37024858 http://dx.doi.org/10.1186/s12911-023-02155-x |
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