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The selection of software and database for metagenomics sequence analysis impacts the outcome of microbial profiling and pathogen detection

Shotgun metagenomic sequencing analysis is widely used for microbial profiling of biological specimens and pathogen detection. However, very little is known about the technical biases caused by the choice of analysis software and databases on the biological specimen. In this study, we evaluated diff...

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Detalles Bibliográficos
Autores principales: Xu, Ruijie, Rajeev, Sreekumari, Salvador, Liliana C. M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10081788/
https://www.ncbi.nlm.nih.gov/pubmed/37027361
http://dx.doi.org/10.1371/journal.pone.0284031