Cargando…

Single and multi-trait genomic prediction for agronomic traits in Euterpe edulis

Popularly known as juçaizeiro, Euterpe edulis has been gaining prominence in the fruit growing sector and has demanded the development of superior genetic materials. Since it is a native species and still little studied, the application of more sophisticated techniques can result in higher gains wit...

Descripción completa

Detalles Bibliográficos
Autores principales: Canal, Guilherme Bravim, Barreto, Cynthia Aparecida Valiati, de Almeida, Francine Alves Nogueira, Zaidan, Iasmine Ramos, do Couto, Diego Pereira, Azevedo, Camila Ferreira, Nascimento, Moysés, Ferreira, Marcia Flores da Silva, Ferreira, Adésio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10081805/
https://www.ncbi.nlm.nih.gov/pubmed/37027420
http://dx.doi.org/10.1371/journal.pone.0275407
_version_ 1785021194123083776
author Canal, Guilherme Bravim
Barreto, Cynthia Aparecida Valiati
de Almeida, Francine Alves Nogueira
Zaidan, Iasmine Ramos
do Couto, Diego Pereira
Azevedo, Camila Ferreira
Nascimento, Moysés
Ferreira, Marcia Flores da Silva
Ferreira, Adésio
author_facet Canal, Guilherme Bravim
Barreto, Cynthia Aparecida Valiati
de Almeida, Francine Alves Nogueira
Zaidan, Iasmine Ramos
do Couto, Diego Pereira
Azevedo, Camila Ferreira
Nascimento, Moysés
Ferreira, Marcia Flores da Silva
Ferreira, Adésio
author_sort Canal, Guilherme Bravim
collection PubMed
description Popularly known as juçaizeiro, Euterpe edulis has been gaining prominence in the fruit growing sector and has demanded the development of superior genetic materials. Since it is a native species and still little studied, the application of more sophisticated techniques can result in higher gains with less time. Until now, there are no studies that apply genomic prediction for this crop, especially in multi-trait analysis. In this sense, this study aimed to apply new methods and breeding techniques for the juçaizeiro, to optimize this breeding program through the application of genomic prediction. This data consisted of 275 juçaizeiro genotypes from a population of Rio Novo do Sul-ES, Brazil. The genomic prediction was performed using the multi-trait (G-BLUP MT) and single-trait (G-BLUP ST) models and the selection of superior genotypes was based on a selection index. Similar results for predictive ability were observed for both models. However, the G-BLUP ST model provided greater selection gains when compared to the G-BLUP MT. For this reason, the genomic estimated breeding values (GEBVs) from the G-BLUP ST, were used to select the six superior genotypes (UFES.A.RN.390, UFES.A.RN.386, UFES.A.RN.080, UFES.A.RN.383, UFES.S.RN.098, and UFES.S.RN.093). This was intended to provide superior genetic materials for the development of seedlings and implantation of productive orchards, which will meet the demands of the productive, industrial and consumer market.
format Online
Article
Text
id pubmed-10081805
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-100818052023-04-08 Single and multi-trait genomic prediction for agronomic traits in Euterpe edulis Canal, Guilherme Bravim Barreto, Cynthia Aparecida Valiati de Almeida, Francine Alves Nogueira Zaidan, Iasmine Ramos do Couto, Diego Pereira Azevedo, Camila Ferreira Nascimento, Moysés Ferreira, Marcia Flores da Silva Ferreira, Adésio PLoS One Research Article Popularly known as juçaizeiro, Euterpe edulis has been gaining prominence in the fruit growing sector and has demanded the development of superior genetic materials. Since it is a native species and still little studied, the application of more sophisticated techniques can result in higher gains with less time. Until now, there are no studies that apply genomic prediction for this crop, especially in multi-trait analysis. In this sense, this study aimed to apply new methods and breeding techniques for the juçaizeiro, to optimize this breeding program through the application of genomic prediction. This data consisted of 275 juçaizeiro genotypes from a population of Rio Novo do Sul-ES, Brazil. The genomic prediction was performed using the multi-trait (G-BLUP MT) and single-trait (G-BLUP ST) models and the selection of superior genotypes was based on a selection index. Similar results for predictive ability were observed for both models. However, the G-BLUP ST model provided greater selection gains when compared to the G-BLUP MT. For this reason, the genomic estimated breeding values (GEBVs) from the G-BLUP ST, were used to select the six superior genotypes (UFES.A.RN.390, UFES.A.RN.386, UFES.A.RN.080, UFES.A.RN.383, UFES.S.RN.098, and UFES.S.RN.093). This was intended to provide superior genetic materials for the development of seedlings and implantation of productive orchards, which will meet the demands of the productive, industrial and consumer market. Public Library of Science 2023-04-07 /pmc/articles/PMC10081805/ /pubmed/37027420 http://dx.doi.org/10.1371/journal.pone.0275407 Text en © 2023 Canal et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Canal, Guilherme Bravim
Barreto, Cynthia Aparecida Valiati
de Almeida, Francine Alves Nogueira
Zaidan, Iasmine Ramos
do Couto, Diego Pereira
Azevedo, Camila Ferreira
Nascimento, Moysés
Ferreira, Marcia Flores da Silva
Ferreira, Adésio
Single and multi-trait genomic prediction for agronomic traits in Euterpe edulis
title Single and multi-trait genomic prediction for agronomic traits in Euterpe edulis
title_full Single and multi-trait genomic prediction for agronomic traits in Euterpe edulis
title_fullStr Single and multi-trait genomic prediction for agronomic traits in Euterpe edulis
title_full_unstemmed Single and multi-trait genomic prediction for agronomic traits in Euterpe edulis
title_short Single and multi-trait genomic prediction for agronomic traits in Euterpe edulis
title_sort single and multi-trait genomic prediction for agronomic traits in euterpe edulis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10081805/
https://www.ncbi.nlm.nih.gov/pubmed/37027420
http://dx.doi.org/10.1371/journal.pone.0275407
work_keys_str_mv AT canalguilhermebravim singleandmultitraitgenomicpredictionforagronomictraitsineuterpeedulis
AT barretocynthiaaparecidavaliati singleandmultitraitgenomicpredictionforagronomictraitsineuterpeedulis
AT dealmeidafrancinealvesnogueira singleandmultitraitgenomicpredictionforagronomictraitsineuterpeedulis
AT zaidaniasmineramos singleandmultitraitgenomicpredictionforagronomictraitsineuterpeedulis
AT docoutodiegopereira singleandmultitraitgenomicpredictionforagronomictraitsineuterpeedulis
AT azevedocamilaferreira singleandmultitraitgenomicpredictionforagronomictraitsineuterpeedulis
AT nascimentomoyses singleandmultitraitgenomicpredictionforagronomictraitsineuterpeedulis
AT ferreiramarciafloresdasilva singleandmultitraitgenomicpredictionforagronomictraitsineuterpeedulis
AT ferreiraadesio singleandmultitraitgenomicpredictionforagronomictraitsineuterpeedulis