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Deep-learning-based survival prediction of patients with cutaneous malignant melanoma
BACKGROUND: This study obtained data on patients with cutaneous malignant melanoma (CMM) from the Surveillance, Epidemiology, and End Results (SEER) database, and used a deep learning and neural network (DeepSurv) model to predict the survival rate of patients with CMM and evaluate its effectiveness...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10084770/ https://www.ncbi.nlm.nih.gov/pubmed/37051218 http://dx.doi.org/10.3389/fmed.2023.1165865 |
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author | Yu, Hai Yang, Wei Wu, Shi Xi, Shaohui Xia, Xichun Zhao, Qi Ming, Wai-kit Wu, Lifang Hu, Yunfeng Deng, Liehua Lyu, Jun |
author_facet | Yu, Hai Yang, Wei Wu, Shi Xi, Shaohui Xia, Xichun Zhao, Qi Ming, Wai-kit Wu, Lifang Hu, Yunfeng Deng, Liehua Lyu, Jun |
author_sort | Yu, Hai |
collection | PubMed |
description | BACKGROUND: This study obtained data on patients with cutaneous malignant melanoma (CMM) from the Surveillance, Epidemiology, and End Results (SEER) database, and used a deep learning and neural network (DeepSurv) model to predict the survival rate of patients with CMM and evaluate its effectiveness. METHODS: We collected information on patients with CMM between 2004 and 2015 from the SEER database. We then randomly divided the patients into training and testing cohorts at a 7:3 ratio. The likelihood that patients with CMM will survive was forecasted using the DeepSurv model, and its results were compared with those of the Cox proportional-hazards (CoxPH) model. The calibration curves, time-dependent area under the receiver operating characteristic curve (AUC), and concordance index (C-index) were used to assess the prediction abilities of the model. RESULTS: This study comprised 37,758 patients with CMM: 26,430 in the training cohort and 11,329 in the testing cohort. The CoxPH model demonstrated that the survival of patients with CMM was significantly influenced by age, sex, marital status, summary stage, surgery, radiotherapy, chemotherapy, postoperative lymph node dissection, tumor size, and tumor extension. The C-index of the CoxPH model was 0.875. We also constructed the DeepSurv model using the data from the training cohort, and its C-index was 0.910. We examined how well the aforementioned two models predicted outcomes. The 1-, 3-, and 5-year AUCs were 0.928, 0.837, and 0.855, respectively, for the CoxPH model, and 0.971, 0.947, and 0.942 for the DeepSurv model. The DeepSurv model presented a greater predictive effect on patients with CMM, and its reliability was better than that of the CoxPH model according to both the AUC value and the calibration curve. CONCLUSION: The DeepSurv model, which we developed based on the data of patients with CMM in the SEER database, was found to be more effective than the CoxPH model in predicting the survival time of patients with CMM. |
format | Online Article Text |
id | pubmed-10084770 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100847702023-04-11 Deep-learning-based survival prediction of patients with cutaneous malignant melanoma Yu, Hai Yang, Wei Wu, Shi Xi, Shaohui Xia, Xichun Zhao, Qi Ming, Wai-kit Wu, Lifang Hu, Yunfeng Deng, Liehua Lyu, Jun Front Med (Lausanne) Medicine BACKGROUND: This study obtained data on patients with cutaneous malignant melanoma (CMM) from the Surveillance, Epidemiology, and End Results (SEER) database, and used a deep learning and neural network (DeepSurv) model to predict the survival rate of patients with CMM and evaluate its effectiveness. METHODS: We collected information on patients with CMM between 2004 and 2015 from the SEER database. We then randomly divided the patients into training and testing cohorts at a 7:3 ratio. The likelihood that patients with CMM will survive was forecasted using the DeepSurv model, and its results were compared with those of the Cox proportional-hazards (CoxPH) model. The calibration curves, time-dependent area under the receiver operating characteristic curve (AUC), and concordance index (C-index) were used to assess the prediction abilities of the model. RESULTS: This study comprised 37,758 patients with CMM: 26,430 in the training cohort and 11,329 in the testing cohort. The CoxPH model demonstrated that the survival of patients with CMM was significantly influenced by age, sex, marital status, summary stage, surgery, radiotherapy, chemotherapy, postoperative lymph node dissection, tumor size, and tumor extension. The C-index of the CoxPH model was 0.875. We also constructed the DeepSurv model using the data from the training cohort, and its C-index was 0.910. We examined how well the aforementioned two models predicted outcomes. The 1-, 3-, and 5-year AUCs were 0.928, 0.837, and 0.855, respectively, for the CoxPH model, and 0.971, 0.947, and 0.942 for the DeepSurv model. The DeepSurv model presented a greater predictive effect on patients with CMM, and its reliability was better than that of the CoxPH model according to both the AUC value and the calibration curve. CONCLUSION: The DeepSurv model, which we developed based on the data of patients with CMM in the SEER database, was found to be more effective than the CoxPH model in predicting the survival time of patients with CMM. Frontiers Media S.A. 2023-03-27 /pmc/articles/PMC10084770/ /pubmed/37051218 http://dx.doi.org/10.3389/fmed.2023.1165865 Text en Copyright © 2023 Yu, Yang, Wu, Shaohui, Xia, Zhao, Ming, Wu, Hu, Deng and Lyu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Medicine Yu, Hai Yang, Wei Wu, Shi Xi, Shaohui Xia, Xichun Zhao, Qi Ming, Wai-kit Wu, Lifang Hu, Yunfeng Deng, Liehua Lyu, Jun Deep-learning-based survival prediction of patients with cutaneous malignant melanoma |
title | Deep-learning-based survival prediction of patients with cutaneous malignant melanoma |
title_full | Deep-learning-based survival prediction of patients with cutaneous malignant melanoma |
title_fullStr | Deep-learning-based survival prediction of patients with cutaneous malignant melanoma |
title_full_unstemmed | Deep-learning-based survival prediction of patients with cutaneous malignant melanoma |
title_short | Deep-learning-based survival prediction of patients with cutaneous malignant melanoma |
title_sort | deep-learning-based survival prediction of patients with cutaneous malignant melanoma |
topic | Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10084770/ https://www.ncbi.nlm.nih.gov/pubmed/37051218 http://dx.doi.org/10.3389/fmed.2023.1165865 |
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