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Analysis of sequential ruminal temperature sensor data from dairy cows to identify cow subgroups by clustering and predict calving through supervised machine learning

The present study investigated the applicability of a calving prediction model based on supervised machine learning of ruminal temperature (RT) data in dairy cows. The existence of cow subgroups for prepartum RT changes was also examined, and the predictive performance of the model was compared amon...

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Autores principales: FURUKAWA, Eri, YANAGAWA, Yojiro, MATSUZAKI, Akira, KIM, Heejin, BAI, Hanako, TAKAHASHI, Masashi, KATAGIRI, Seiji, HIGAKI, Shogo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Society for Reproduction and Development 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10085770/
https://www.ncbi.nlm.nih.gov/pubmed/36801858
http://dx.doi.org/10.1262/jrd.2022-107
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author FURUKAWA, Eri
YANAGAWA, Yojiro
MATSUZAKI, Akira
KIM, Heejin
BAI, Hanako
TAKAHASHI, Masashi
KATAGIRI, Seiji
HIGAKI, Shogo
author_facet FURUKAWA, Eri
YANAGAWA, Yojiro
MATSUZAKI, Akira
KIM, Heejin
BAI, Hanako
TAKAHASHI, Masashi
KATAGIRI, Seiji
HIGAKI, Shogo
author_sort FURUKAWA, Eri
collection PubMed
description The present study investigated the applicability of a calving prediction model based on supervised machine learning of ruminal temperature (RT) data in dairy cows. The existence of cow subgroups for prepartum RT changes was also examined, and the predictive performance of the model was compared among these subgroups. RT data were collected from 24 Holstein cows at 10 min intervals using an RT sensor system. The average hourly RT was calculated and data were expressed as residual RTs (rRT = actual RT − mean RT for the same time on the previous three days). The mean rRT decreased beginning at approximately 48 h before calving to a low of −0.5°C at 5 h before calving. However, two cow subgroups were identified: cows with a late and small rRT decrease (Cluster 1, n = 9) and those with an early and large rRT decrease (Cluster 2, n = 15). A calving prediction model was developed using five features extracted from the sensor data (indicative of prepartum rRT changes) through a support vector machine. Cross-validation showed that calving within 24 h was predicted with a sensitivity of 87.5% (21/24) and precision of 77.8% (21/27). A significant difference in sensitivity was observed between Clusters 1 and 2 (66.7 vs. 100%, respectively), while none was observed for precision. Therefore, the model based on RT data with supervised machine learning has the potential to efficiently predict calving, although improvements for specific cow subgroups are required.
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spelling pubmed-100857702023-04-12 Analysis of sequential ruminal temperature sensor data from dairy cows to identify cow subgroups by clustering and predict calving through supervised machine learning FURUKAWA, Eri YANAGAWA, Yojiro MATSUZAKI, Akira KIM, Heejin BAI, Hanako TAKAHASHI, Masashi KATAGIRI, Seiji HIGAKI, Shogo J Reprod Dev Original Article The present study investigated the applicability of a calving prediction model based on supervised machine learning of ruminal temperature (RT) data in dairy cows. The existence of cow subgroups for prepartum RT changes was also examined, and the predictive performance of the model was compared among these subgroups. RT data were collected from 24 Holstein cows at 10 min intervals using an RT sensor system. The average hourly RT was calculated and data were expressed as residual RTs (rRT = actual RT − mean RT for the same time on the previous three days). The mean rRT decreased beginning at approximately 48 h before calving to a low of −0.5°C at 5 h before calving. However, two cow subgroups were identified: cows with a late and small rRT decrease (Cluster 1, n = 9) and those with an early and large rRT decrease (Cluster 2, n = 15). A calving prediction model was developed using five features extracted from the sensor data (indicative of prepartum rRT changes) through a support vector machine. Cross-validation showed that calving within 24 h was predicted with a sensitivity of 87.5% (21/24) and precision of 77.8% (21/27). A significant difference in sensitivity was observed between Clusters 1 and 2 (66.7 vs. 100%, respectively), while none was observed for precision. Therefore, the model based on RT data with supervised machine learning has the potential to efficiently predict calving, although improvements for specific cow subgroups are required. The Society for Reproduction and Development 2023-02-17 2023-04 /pmc/articles/PMC10085770/ /pubmed/36801858 http://dx.doi.org/10.1262/jrd.2022-107 Text en ©2023 Society for Reproduction and Development https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial No Derivatives (by-nc-nd) License. (CC-BY-NC-ND 4.0: https://creativecommons.org/licenses/by-nc-nd/4.0/)
spellingShingle Original Article
FURUKAWA, Eri
YANAGAWA, Yojiro
MATSUZAKI, Akira
KIM, Heejin
BAI, Hanako
TAKAHASHI, Masashi
KATAGIRI, Seiji
HIGAKI, Shogo
Analysis of sequential ruminal temperature sensor data from dairy cows to identify cow subgroups by clustering and predict calving through supervised machine learning
title Analysis of sequential ruminal temperature sensor data from dairy cows to identify cow subgroups by clustering and predict calving through supervised machine learning
title_full Analysis of sequential ruminal temperature sensor data from dairy cows to identify cow subgroups by clustering and predict calving through supervised machine learning
title_fullStr Analysis of sequential ruminal temperature sensor data from dairy cows to identify cow subgroups by clustering and predict calving through supervised machine learning
title_full_unstemmed Analysis of sequential ruminal temperature sensor data from dairy cows to identify cow subgroups by clustering and predict calving through supervised machine learning
title_short Analysis of sequential ruminal temperature sensor data from dairy cows to identify cow subgroups by clustering and predict calving through supervised machine learning
title_sort analysis of sequential ruminal temperature sensor data from dairy cows to identify cow subgroups by clustering and predict calving through supervised machine learning
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10085770/
https://www.ncbi.nlm.nih.gov/pubmed/36801858
http://dx.doi.org/10.1262/jrd.2022-107
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