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Efficient transfection of Atlantic salmon primary hepatocyte cells for functional assays and gene editing
The expansion of genomic resources for Atlantic salmon over the past half decade has enabled efficient interrogation of genetic traits by large-scale correlation of genotype to phenotype. Moving from correlation to causation will require genotype–phenotype relationships to be tested experimentally i...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10085798/ https://www.ncbi.nlm.nih.gov/pubmed/36786483 http://dx.doi.org/10.1093/g3journal/jkad039 |
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author | Datsomor, Alex K Wilberg, Ragnhild Torgersen, Jacob S Sandve, Simen R Harvey, Thomas N |
author_facet | Datsomor, Alex K Wilberg, Ragnhild Torgersen, Jacob S Sandve, Simen R Harvey, Thomas N |
author_sort | Datsomor, Alex K |
collection | PubMed |
description | The expansion of genomic resources for Atlantic salmon over the past half decade has enabled efficient interrogation of genetic traits by large-scale correlation of genotype to phenotype. Moving from correlation to causation will require genotype–phenotype relationships to be tested experimentally in a cost-efficient and cell context-relevant manner. To enable such future experiments, we have developed a method for the isolation and genetic manipulation of primary hepatocytes from Atlantic salmon for use in heterologous expression, reporter assay, and gene editing experiments. We chose the liver as the tissue of interest because it is the metabolic hub and many current Atlantic salmon research projects focus on understanding metabolic processes to improve traits such as the growth rate, total fat content, and omega-3 content. We find that isolated primary hepatocytes are optimally transfected with both plasmid and ribonucleoprotein using a Neon electroporator at 1,400 V, 10 ms, and 2 pulses. Transfection efficiency with plasmid and cutting efficiency with ribonucleoprotein were optimally 46% and 60%, respectively. We also demonstrate a 26 times increase in luciferase expression under the promoter of the key liver metabolic gene, elovl5b, compared to an empty vector, in line with expected liver-specific expression. Taken together, this work provides a valuable resource enabling transfection and gene editing experiments in a context-relevant and cost-effective system. |
format | Online Article Text |
id | pubmed-10085798 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-100857982023-04-12 Efficient transfection of Atlantic salmon primary hepatocyte cells for functional assays and gene editing Datsomor, Alex K Wilberg, Ragnhild Torgersen, Jacob S Sandve, Simen R Harvey, Thomas N G3 (Bethesda) Investigation The expansion of genomic resources for Atlantic salmon over the past half decade has enabled efficient interrogation of genetic traits by large-scale correlation of genotype to phenotype. Moving from correlation to causation will require genotype–phenotype relationships to be tested experimentally in a cost-efficient and cell context-relevant manner. To enable such future experiments, we have developed a method for the isolation and genetic manipulation of primary hepatocytes from Atlantic salmon for use in heterologous expression, reporter assay, and gene editing experiments. We chose the liver as the tissue of interest because it is the metabolic hub and many current Atlantic salmon research projects focus on understanding metabolic processes to improve traits such as the growth rate, total fat content, and omega-3 content. We find that isolated primary hepatocytes are optimally transfected with both plasmid and ribonucleoprotein using a Neon electroporator at 1,400 V, 10 ms, and 2 pulses. Transfection efficiency with plasmid and cutting efficiency with ribonucleoprotein were optimally 46% and 60%, respectively. We also demonstrate a 26 times increase in luciferase expression under the promoter of the key liver metabolic gene, elovl5b, compared to an empty vector, in line with expected liver-specific expression. Taken together, this work provides a valuable resource enabling transfection and gene editing experiments in a context-relevant and cost-effective system. Oxford University Press 2023-02-14 /pmc/articles/PMC10085798/ /pubmed/36786483 http://dx.doi.org/10.1093/g3journal/jkad039 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of the Genetics Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Investigation Datsomor, Alex K Wilberg, Ragnhild Torgersen, Jacob S Sandve, Simen R Harvey, Thomas N Efficient transfection of Atlantic salmon primary hepatocyte cells for functional assays and gene editing |
title | Efficient transfection of Atlantic salmon primary hepatocyte cells for functional assays and gene editing |
title_full | Efficient transfection of Atlantic salmon primary hepatocyte cells for functional assays and gene editing |
title_fullStr | Efficient transfection of Atlantic salmon primary hepatocyte cells for functional assays and gene editing |
title_full_unstemmed | Efficient transfection of Atlantic salmon primary hepatocyte cells for functional assays and gene editing |
title_short | Efficient transfection of Atlantic salmon primary hepatocyte cells for functional assays and gene editing |
title_sort | efficient transfection of atlantic salmon primary hepatocyte cells for functional assays and gene editing |
topic | Investigation |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10085798/ https://www.ncbi.nlm.nih.gov/pubmed/36786483 http://dx.doi.org/10.1093/g3journal/jkad039 |
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