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The prognostic and immunological role of MYB: from bladder cancer validation to pan-cancer analysis
Background: MYB proto-oncogene is verified as a transcription factor. Although emerging evidence showed that MYB plays a critical part in tumor progression and immunity, a systematic pan-cancer analysis of MYB still remains to be performed for determining whether MYB could serve as a biomarker for c...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Portland Press Ltd.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10086116/ https://www.ncbi.nlm.nih.gov/pubmed/36994664 http://dx.doi.org/10.1042/BSR20222627 |
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author | Cui, Xiaobo Zhang, Chao Zhang, Liqi Yan, Huaqing |
author_facet | Cui, Xiaobo Zhang, Chao Zhang, Liqi Yan, Huaqing |
author_sort | Cui, Xiaobo |
collection | PubMed |
description | Background: MYB proto-oncogene is verified as a transcription factor. Although emerging evidence showed that MYB plays a critical part in tumor progression and immunity, a systematic pan-cancer analysis of MYB still remains to be performed for determining whether MYB could serve as a biomarker for cancer screening, prognosis prediction and accurate therapy design in various human cancers. Methods: In the present study, we performed qRT-PCR, wound healing assay and transwell assay to validate the expression level and biological function of MYB in bladder cancer. Then, we utilized several open-source databases including UCSC Xena database, TCGA, GTEx, etc. Online tools was used to process the raw data from UCSC Xena database. Results: We found that the expression level of MYB is significantly higher in bladder cancer cell lines than urothelial cells. Further experiments confirmed that overexpression of MYB enhanced the ability of migration in bladder cancer. Next, we found that the expression level of MYB is significantly higher in most cancers. Meanwhile, MYB expression was positively or negatively related with the prognosis in different cancer types. In addition, MYB expression is significantly related to immune score and immune cells in most cancer types. Moreover, MYB act as an immunotherapy biomarker superior to several traditional immunotherapy biomarkers. Finally, deep deletion was the most frequent genetic alteration of MYB. Conclusion: MYB may serve as a powerful biomarker for tumor screening, prognostic, individualized treatment strategy in a broad range of malignancies. |
format | Online Article Text |
id | pubmed-10086116 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Portland Press Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100861162023-04-12 The prognostic and immunological role of MYB: from bladder cancer validation to pan-cancer analysis Cui, Xiaobo Zhang, Chao Zhang, Liqi Yan, Huaqing Biosci Rep Bioinformatics Background: MYB proto-oncogene is verified as a transcription factor. Although emerging evidence showed that MYB plays a critical part in tumor progression and immunity, a systematic pan-cancer analysis of MYB still remains to be performed for determining whether MYB could serve as a biomarker for cancer screening, prognosis prediction and accurate therapy design in various human cancers. Methods: In the present study, we performed qRT-PCR, wound healing assay and transwell assay to validate the expression level and biological function of MYB in bladder cancer. Then, we utilized several open-source databases including UCSC Xena database, TCGA, GTEx, etc. Online tools was used to process the raw data from UCSC Xena database. Results: We found that the expression level of MYB is significantly higher in bladder cancer cell lines than urothelial cells. Further experiments confirmed that overexpression of MYB enhanced the ability of migration in bladder cancer. Next, we found that the expression level of MYB is significantly higher in most cancers. Meanwhile, MYB expression was positively or negatively related with the prognosis in different cancer types. In addition, MYB expression is significantly related to immune score and immune cells in most cancer types. Moreover, MYB act as an immunotherapy biomarker superior to several traditional immunotherapy biomarkers. Finally, deep deletion was the most frequent genetic alteration of MYB. Conclusion: MYB may serve as a powerful biomarker for tumor screening, prognostic, individualized treatment strategy in a broad range of malignancies. Portland Press Ltd. 2023-04-06 /pmc/articles/PMC10086116/ /pubmed/36994664 http://dx.doi.org/10.1042/BSR20222627 Text en © 2023 The Author(s). https://creativecommons.org/licenses/by/4.0/This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY) (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Bioinformatics Cui, Xiaobo Zhang, Chao Zhang, Liqi Yan, Huaqing The prognostic and immunological role of MYB: from bladder cancer validation to pan-cancer analysis |
title | The prognostic and immunological role of MYB: from bladder cancer validation to pan-cancer analysis |
title_full | The prognostic and immunological role of MYB: from bladder cancer validation to pan-cancer analysis |
title_fullStr | The prognostic and immunological role of MYB: from bladder cancer validation to pan-cancer analysis |
title_full_unstemmed | The prognostic and immunological role of MYB: from bladder cancer validation to pan-cancer analysis |
title_short | The prognostic and immunological role of MYB: from bladder cancer validation to pan-cancer analysis |
title_sort | prognostic and immunological role of myb: from bladder cancer validation to pan-cancer analysis |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10086116/ https://www.ncbi.nlm.nih.gov/pubmed/36994664 http://dx.doi.org/10.1042/BSR20222627 |
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