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Artificial intelligence annotated clinical-pathologic risk model to predict outcomes of advanced gastric cancer
BACKGROUND: Gastric cancer with synchronous distant metastases indicates a dismal prognosis. The success in survival improvement mainly relies on our ability to predict the potential benefit of a therapy. Our objective is to develop an artificial intelligence annotated clinical-pathologic risk model...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10086433/ https://www.ncbi.nlm.nih.gov/pubmed/37056330 http://dx.doi.org/10.3389/fonc.2023.1099360 |
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author | Chen, Yan Shou, Lin Xia, Ying Deng, Yanju Li, Qianguo Huang, Zhishuang Li, Youlan Li, Yanmei Cai, Wenliang Wang, Yueshan Cheng, Yingying Chen, Hongzhuan Wan, Li |
author_facet | Chen, Yan Shou, Lin Xia, Ying Deng, Yanju Li, Qianguo Huang, Zhishuang Li, Youlan Li, Yanmei Cai, Wenliang Wang, Yueshan Cheng, Yingying Chen, Hongzhuan Wan, Li |
author_sort | Chen, Yan |
collection | PubMed |
description | BACKGROUND: Gastric cancer with synchronous distant metastases indicates a dismal prognosis. The success in survival improvement mainly relies on our ability to predict the potential benefit of a therapy. Our objective is to develop an artificial intelligence annotated clinical-pathologic risk model to predict its outcomes. METHODS: In participants (n=47553) with gastric cancer of the surveillance, epidemiology, and end results program, we selected patients with distant metastases at first diagnosis, complete clinical-pathologic data and follow-up information. Patients were randomly divided into the training and test cohort at 7:3 ratio. 93 patients with advanced gastric cancer from six other cancer centers were collected as the external validation cohort. Multivariable analysis was used to identify the prognosis-related clinical-pathologic features. Then a survival prediction model was established and validated. Importantly, we provided explanations to the prediction with artificial intelligence SHAP (Shapley additive explanations) method. We also provide novel insights into treatment options. RESULTS: Data from a total 2549 patients were included in model development and internal test (median age, 61 years [range, 53-69 years]; 1725 [67.7%] male). Data from an additional 93 patients were collected as the external validation cohort (median age, 59 years [range, 48-66 years]; 51 [54.8%] male). The clinical-pathologic model achieved a consistently high accuracy for predicting prognosis in the training (C-index: 0.705 [range, 0.690-0.720]), test (C-index: 0.737 [range, 0.717-0.757]), and external validation (C-index: 0.694 [range, 0.562-0.826]) cohorts. Shapley values indicated that undergoing surgery, chemotherapy, young, absence of lung metastases and well differentiated were the top 5 contributors to the high likelihood of survival. A combination of surgery and chemotherapy had the greatest benefit. However, aggressive treatment did not equate to a survival benefit. SHAP dependence plots demonstrated insightful nonlinear interactive associations among predictors in survival benefit prediction. For example, patients who were elderly, or poor differentiated, or presence of lung or bone metastases had a worse prognosis if they undergo surgery or chemotherapy, while patients with metastases to liver alone seemed to gain benefit from surgery and chemotherapy. CONCLUSION: In this large multicenter cohort study, we developed an artificial intelligence annotated clinical-pathologic risk model to predict outcomes of advanced gastric cancer. It could be used to discuss treatment options. |
format | Online Article Text |
id | pubmed-10086433 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100864332023-04-12 Artificial intelligence annotated clinical-pathologic risk model to predict outcomes of advanced gastric cancer Chen, Yan Shou, Lin Xia, Ying Deng, Yanju Li, Qianguo Huang, Zhishuang Li, Youlan Li, Yanmei Cai, Wenliang Wang, Yueshan Cheng, Yingying Chen, Hongzhuan Wan, Li Front Oncol Oncology BACKGROUND: Gastric cancer with synchronous distant metastases indicates a dismal prognosis. The success in survival improvement mainly relies on our ability to predict the potential benefit of a therapy. Our objective is to develop an artificial intelligence annotated clinical-pathologic risk model to predict its outcomes. METHODS: In participants (n=47553) with gastric cancer of the surveillance, epidemiology, and end results program, we selected patients with distant metastases at first diagnosis, complete clinical-pathologic data and follow-up information. Patients were randomly divided into the training and test cohort at 7:3 ratio. 93 patients with advanced gastric cancer from six other cancer centers were collected as the external validation cohort. Multivariable analysis was used to identify the prognosis-related clinical-pathologic features. Then a survival prediction model was established and validated. Importantly, we provided explanations to the prediction with artificial intelligence SHAP (Shapley additive explanations) method. We also provide novel insights into treatment options. RESULTS: Data from a total 2549 patients were included in model development and internal test (median age, 61 years [range, 53-69 years]; 1725 [67.7%] male). Data from an additional 93 patients were collected as the external validation cohort (median age, 59 years [range, 48-66 years]; 51 [54.8%] male). The clinical-pathologic model achieved a consistently high accuracy for predicting prognosis in the training (C-index: 0.705 [range, 0.690-0.720]), test (C-index: 0.737 [range, 0.717-0.757]), and external validation (C-index: 0.694 [range, 0.562-0.826]) cohorts. Shapley values indicated that undergoing surgery, chemotherapy, young, absence of lung metastases and well differentiated were the top 5 contributors to the high likelihood of survival. A combination of surgery and chemotherapy had the greatest benefit. However, aggressive treatment did not equate to a survival benefit. SHAP dependence plots demonstrated insightful nonlinear interactive associations among predictors in survival benefit prediction. For example, patients who were elderly, or poor differentiated, or presence of lung or bone metastases had a worse prognosis if they undergo surgery or chemotherapy, while patients with metastases to liver alone seemed to gain benefit from surgery and chemotherapy. CONCLUSION: In this large multicenter cohort study, we developed an artificial intelligence annotated clinical-pathologic risk model to predict outcomes of advanced gastric cancer. It could be used to discuss treatment options. Frontiers Media S.A. 2023-03-28 /pmc/articles/PMC10086433/ /pubmed/37056330 http://dx.doi.org/10.3389/fonc.2023.1099360 Text en Copyright © 2023 Chen, Shou, Xia, Deng, Li, Huang, Li, Li, Cai, Wang, Cheng, Chen and Wan https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Chen, Yan Shou, Lin Xia, Ying Deng, Yanju Li, Qianguo Huang, Zhishuang Li, Youlan Li, Yanmei Cai, Wenliang Wang, Yueshan Cheng, Yingying Chen, Hongzhuan Wan, Li Artificial intelligence annotated clinical-pathologic risk model to predict outcomes of advanced gastric cancer |
title | Artificial intelligence annotated clinical-pathologic risk model to predict outcomes of advanced gastric cancer |
title_full | Artificial intelligence annotated clinical-pathologic risk model to predict outcomes of advanced gastric cancer |
title_fullStr | Artificial intelligence annotated clinical-pathologic risk model to predict outcomes of advanced gastric cancer |
title_full_unstemmed | Artificial intelligence annotated clinical-pathologic risk model to predict outcomes of advanced gastric cancer |
title_short | Artificial intelligence annotated clinical-pathologic risk model to predict outcomes of advanced gastric cancer |
title_sort | artificial intelligence annotated clinical-pathologic risk model to predict outcomes of advanced gastric cancer |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10086433/ https://www.ncbi.nlm.nih.gov/pubmed/37056330 http://dx.doi.org/10.3389/fonc.2023.1099360 |
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