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Non‐physical Species in Chemical Kinetic Models: A Case Study of Diazenyl Hydroxy and Diazenyl Peroxide
Predictive chemical kinetic models often consider hundreds to thousands of intermediate species. An even greater number of species are required to generate pressure‐dependent reaction networks for gas‐phase systems. As this immense chemical search space is being explored using automated tools by app...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10087891/ https://www.ncbi.nlm.nih.gov/pubmed/35949193 http://dx.doi.org/10.1002/cphc.202200373 |
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author | Mitnik, Nelly Haba, Sharon Grinberg Dana, Alon |
author_facet | Mitnik, Nelly Haba, Sharon Grinberg Dana, Alon |
author_sort | Mitnik, Nelly |
collection | PubMed |
description | Predictive chemical kinetic models often consider hundreds to thousands of intermediate species. An even greater number of species are required to generate pressure‐dependent reaction networks for gas‐phase systems. As this immense chemical search space is being explored using automated tools by applying reaction templates, it is probable that non‐physical species will infiltrate the model without being recognized by the compute or a human as such. These non‐physical species might obey chemical intuition as well as requirements coded in the software, e. g., obeying element electron valence constraints, and may consequently remain unnoticed. Non‐physical species become an acute problem when their presence affects a model observable. Correcting a pressure‐dependent network containing a non‐physical species may significantly affect the computed rate coefficient. The present work discusses and analyzes two specific cases of such species, diazenyl hydroxy (⋅N=NOH) and diazenyl peroxide (⋅N=NOOH), both previously suggested as intermediates in nitrogen combustion systems. A comprehensive conformational search did not identify any non‐fragmented energy well, and energy scans performed for diazenyl peroxide (⋅N=NOOH), at DFT and CCSD(T) show that it barrierlessly decomposes. This work highlights a broad implication for future automated chemical kinetic model generation, and provides a significant motivation to standardize non‐physical species identification in chemical kinetic models. |
format | Online Article Text |
id | pubmed-10087891 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100878912023-04-12 Non‐physical Species in Chemical Kinetic Models: A Case Study of Diazenyl Hydroxy and Diazenyl Peroxide Mitnik, Nelly Haba, Sharon Grinberg Dana, Alon Chemphyschem Research Articles Predictive chemical kinetic models often consider hundreds to thousands of intermediate species. An even greater number of species are required to generate pressure‐dependent reaction networks for gas‐phase systems. As this immense chemical search space is being explored using automated tools by applying reaction templates, it is probable that non‐physical species will infiltrate the model without being recognized by the compute or a human as such. These non‐physical species might obey chemical intuition as well as requirements coded in the software, e. g., obeying element electron valence constraints, and may consequently remain unnoticed. Non‐physical species become an acute problem when their presence affects a model observable. Correcting a pressure‐dependent network containing a non‐physical species may significantly affect the computed rate coefficient. The present work discusses and analyzes two specific cases of such species, diazenyl hydroxy (⋅N=NOH) and diazenyl peroxide (⋅N=NOOH), both previously suggested as intermediates in nitrogen combustion systems. A comprehensive conformational search did not identify any non‐fragmented energy well, and energy scans performed for diazenyl peroxide (⋅N=NOOH), at DFT and CCSD(T) show that it barrierlessly decomposes. This work highlights a broad implication for future automated chemical kinetic model generation, and provides a significant motivation to standardize non‐physical species identification in chemical kinetic models. John Wiley and Sons Inc. 2022-09-15 2022-12-05 /pmc/articles/PMC10087891/ /pubmed/35949193 http://dx.doi.org/10.1002/cphc.202200373 Text en © 2022 The Authors. ChemPhysChem published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Research Articles Mitnik, Nelly Haba, Sharon Grinberg Dana, Alon Non‐physical Species in Chemical Kinetic Models: A Case Study of Diazenyl Hydroxy and Diazenyl Peroxide |
title | Non‐physical Species in Chemical Kinetic Models: A Case Study of Diazenyl Hydroxy and Diazenyl Peroxide
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title_full | Non‐physical Species in Chemical Kinetic Models: A Case Study of Diazenyl Hydroxy and Diazenyl Peroxide
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title_fullStr | Non‐physical Species in Chemical Kinetic Models: A Case Study of Diazenyl Hydroxy and Diazenyl Peroxide
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title_full_unstemmed | Non‐physical Species in Chemical Kinetic Models: A Case Study of Diazenyl Hydroxy and Diazenyl Peroxide
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title_short | Non‐physical Species in Chemical Kinetic Models: A Case Study of Diazenyl Hydroxy and Diazenyl Peroxide
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title_sort | non‐physical species in chemical kinetic models: a case study of diazenyl hydroxy and diazenyl peroxide |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10087891/ https://www.ncbi.nlm.nih.gov/pubmed/35949193 http://dx.doi.org/10.1002/cphc.202200373 |
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