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Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin
Quantitative systems pharmacology (QSP) models integrate comprehensive qualitative and quantitative knowledge about pharmacologically relevant processes. We previously proposed a first approach to leverage the knowledge in QSP models to derive simpler, mechanism‐based pharmacodynamic (PD) models. Th...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10088086/ https://www.ncbi.nlm.nih.gov/pubmed/36866520 http://dx.doi.org/10.1002/psp4.12903 |
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author | Falkenhagen, Undine Knöchel, Jane Kloft, Charlotte Huisinga, Wilhelm |
author_facet | Falkenhagen, Undine Knöchel, Jane Kloft, Charlotte Huisinga, Wilhelm |
author_sort | Falkenhagen, Undine |
collection | PubMed |
description | Quantitative systems pharmacology (QSP) models integrate comprehensive qualitative and quantitative knowledge about pharmacologically relevant processes. We previously proposed a first approach to leverage the knowledge in QSP models to derive simpler, mechanism‐based pharmacodynamic (PD) models. Their complexity, however, is typically still too large to be used in the population analysis of clinical data. Here, we extend the approach beyond state reduction to also include the simplification of reaction rates, elimination of reactions, and analytic solutions. We additionally ensure that the reduced model maintains a prespecified approximation quality not only for a reference individual but also for a diverse virtual population. We illustrate the extended approach for the warfarin effect on blood coagulation. Using the model‐reduction approach, we derive a novel small‐scale warfarin/international normalized ratio model and demonstrate its suitability for biomarker identification. Due to the systematic nature of the approach in comparison with empirical model building, the proposed model‐reduction algorithm provides an improved rationale to build PD models also from QSP models in other applications. |
format | Online Article Text |
id | pubmed-10088086 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100880862023-04-12 Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin Falkenhagen, Undine Knöchel, Jane Kloft, Charlotte Huisinga, Wilhelm CPT Pharmacometrics Syst Pharmacol Research Quantitative systems pharmacology (QSP) models integrate comprehensive qualitative and quantitative knowledge about pharmacologically relevant processes. We previously proposed a first approach to leverage the knowledge in QSP models to derive simpler, mechanism‐based pharmacodynamic (PD) models. Their complexity, however, is typically still too large to be used in the population analysis of clinical data. Here, we extend the approach beyond state reduction to also include the simplification of reaction rates, elimination of reactions, and analytic solutions. We additionally ensure that the reduced model maintains a prespecified approximation quality not only for a reference individual but also for a diverse virtual population. We illustrate the extended approach for the warfarin effect on blood coagulation. Using the model‐reduction approach, we derive a novel small‐scale warfarin/international normalized ratio model and demonstrate its suitability for biomarker identification. Due to the systematic nature of the approach in comparison with empirical model building, the proposed model‐reduction algorithm provides an improved rationale to build PD models also from QSP models in other applications. John Wiley and Sons Inc. 2023-03-03 /pmc/articles/PMC10088086/ /pubmed/36866520 http://dx.doi.org/10.1002/psp4.12903 Text en © 2023 The Authors. CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Research Falkenhagen, Undine Knöchel, Jane Kloft, Charlotte Huisinga, Wilhelm Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin |
title | Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin |
title_full | Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin |
title_fullStr | Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin |
title_full_unstemmed | Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin |
title_short | Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin |
title_sort | deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: an application to warfarin |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10088086/ https://www.ncbi.nlm.nih.gov/pubmed/36866520 http://dx.doi.org/10.1002/psp4.12903 |
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