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Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin

Quantitative systems pharmacology (QSP) models integrate comprehensive qualitative and quantitative knowledge about pharmacologically relevant processes. We previously proposed a first approach to leverage the knowledge in QSP models to derive simpler, mechanism‐based pharmacodynamic (PD) models. Th...

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Detalles Bibliográficos
Autores principales: Falkenhagen, Undine, Knöchel, Jane, Kloft, Charlotte, Huisinga, Wilhelm
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10088086/
https://www.ncbi.nlm.nih.gov/pubmed/36866520
http://dx.doi.org/10.1002/psp4.12903
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author Falkenhagen, Undine
Knöchel, Jane
Kloft, Charlotte
Huisinga, Wilhelm
author_facet Falkenhagen, Undine
Knöchel, Jane
Kloft, Charlotte
Huisinga, Wilhelm
author_sort Falkenhagen, Undine
collection PubMed
description Quantitative systems pharmacology (QSP) models integrate comprehensive qualitative and quantitative knowledge about pharmacologically relevant processes. We previously proposed a first approach to leverage the knowledge in QSP models to derive simpler, mechanism‐based pharmacodynamic (PD) models. Their complexity, however, is typically still too large to be used in the population analysis of clinical data. Here, we extend the approach beyond state reduction to also include the simplification of reaction rates, elimination of reactions, and analytic solutions. We additionally ensure that the reduced model maintains a prespecified approximation quality not only for a reference individual but also for a diverse virtual population. We illustrate the extended approach for the warfarin effect on blood coagulation. Using the model‐reduction approach, we derive a novel small‐scale warfarin/international normalized ratio model and demonstrate its suitability for biomarker identification. Due to the systematic nature of the approach in comparison with empirical model building, the proposed model‐reduction algorithm provides an improved rationale to build PD models also from QSP models in other applications.
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spelling pubmed-100880862023-04-12 Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin Falkenhagen, Undine Knöchel, Jane Kloft, Charlotte Huisinga, Wilhelm CPT Pharmacometrics Syst Pharmacol Research Quantitative systems pharmacology (QSP) models integrate comprehensive qualitative and quantitative knowledge about pharmacologically relevant processes. We previously proposed a first approach to leverage the knowledge in QSP models to derive simpler, mechanism‐based pharmacodynamic (PD) models. Their complexity, however, is typically still too large to be used in the population analysis of clinical data. Here, we extend the approach beyond state reduction to also include the simplification of reaction rates, elimination of reactions, and analytic solutions. We additionally ensure that the reduced model maintains a prespecified approximation quality not only for a reference individual but also for a diverse virtual population. We illustrate the extended approach for the warfarin effect on blood coagulation. Using the model‐reduction approach, we derive a novel small‐scale warfarin/international normalized ratio model and demonstrate its suitability for biomarker identification. Due to the systematic nature of the approach in comparison with empirical model building, the proposed model‐reduction algorithm provides an improved rationale to build PD models also from QSP models in other applications. John Wiley and Sons Inc. 2023-03-03 /pmc/articles/PMC10088086/ /pubmed/36866520 http://dx.doi.org/10.1002/psp4.12903 Text en © 2023 The Authors. CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Research
Falkenhagen, Undine
Knöchel, Jane
Kloft, Charlotte
Huisinga, Wilhelm
Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin
title Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin
title_full Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin
title_fullStr Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin
title_full_unstemmed Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin
title_short Deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: An application to warfarin
title_sort deriving mechanism‐based pharmacodynamic models by reducing quantitative systems pharmacology models: an application to warfarin
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10088086/
https://www.ncbi.nlm.nih.gov/pubmed/36866520
http://dx.doi.org/10.1002/psp4.12903
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