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A mixed phosphine sulfide/selenide structure as an instructional example for how to evaluate the quality of a model

This paper compares variations on a structure model derived from an X-ray diffraction data set from a solid solution of chalcogenide derivatives of cis-1,2-bis­(di­phenyl­phosphan­yl)ethyl­ene, namely, 1,2-(ethene-1,2-di­yl)bis­(di­phenyl­phoshpine sulfide/selenide), C(26)H(22)P(2)S(1.13)Se(0.87). A...

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Detalles Bibliográficos
Autores principales: Parkin, Sean, Cunningham, Jeremy, Rawls, Brian, Bender, John E., Staples, Richard J., Biros, Shannon M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10088320/
https://www.ncbi.nlm.nih.gov/pubmed/37057016
http://dx.doi.org/10.1107/S2056989023002700
Descripción
Sumario:This paper compares variations on a structure model derived from an X-ray diffraction data set from a solid solution of chalcogenide derivatives of cis-1,2-bis­(di­phenyl­phosphan­yl)ethyl­ene, namely, 1,2-(ethene-1,2-di­yl)bis­(di­phenyl­phoshpine sulfide/selenide), C(26)H(22)P(2)S(1.13)Se(0.87). A sequence of processes are presented to ascertain the composition of the crystal, along with strategies for which aspects of the model to inspect to ensure a chemically and crystallographically realistic structure. Criteria include mis-matches between F (obs) (2) and F (calc) (2), plots of |F (obs)| vs |F (calc)|, residual electron density, checkCIF alerts, pitfalls of the OMIT command used to suppress ill-fitting data, comparative size of displacement ellipsoids, and critical inspection of inter­atomic distances. Since the structure is quite small, solves easily, and presents a number of readily expressible refinement concepts, we feel that it would make a straightforward and concise instructional piece for students learning how to determine if their model provides the best fit for the data and show students how to critically assess their structures.