Sequencing and analysis of the complete mitochondrial genome of Eothenomys eleusis Thomas 1911 from China and its phylogenetic analysis

The complete mitogenome sequence of Eothenomys eleusis Thomas 1911 was determined using PCR. A circular double-stranded structure makes up the mitochondrial genome of E. eleusis. The complete length of the mitochondrial genome is 16,419 bp. The mitochondrial genome of E. eleusis included 13 protein-...

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Autores principales: Zhu, Liu, Bi, Zhong-Dan, Qian, Hong-An, Mei, Xiu-Feng, Zhao, Jing-Yu, Zhao, Xin-Xu, Chen, Huan, Zhang, Jun-Sheng, Piao, Zhong-Wan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10088922/
https://www.ncbi.nlm.nih.gov/pubmed/37057130
http://dx.doi.org/10.1080/23802359.2023.2197087
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author Zhu, Liu
Bi, Zhong-Dan
Qian, Hong-An
Mei, Xiu-Feng
Zhao, Jing-Yu
Zhao, Xin-Xu
Chen, Huan
Zhang, Jun-Sheng
Piao, Zhong-Wan
author_facet Zhu, Liu
Bi, Zhong-Dan
Qian, Hong-An
Mei, Xiu-Feng
Zhao, Jing-Yu
Zhao, Xin-Xu
Chen, Huan
Zhang, Jun-Sheng
Piao, Zhong-Wan
author_sort Zhu, Liu
collection PubMed
description The complete mitogenome sequence of Eothenomys eleusis Thomas 1911 was determined using PCR. A circular double-stranded structure makes up the mitochondrial genome of E. eleusis. The complete length of the mitochondrial genome is 16,419 bp. The mitochondrial genome of E. eleusis included 13 protein-coding genes, 1 control region, 22 tRNA genes, 2 rRNA genes and 1 origin of L strand replication. The total base composition of E. eleusis mitochondrial genome was A (32.6%), T (26.3%), G (13.6%) and C (27.5%). We found significant A-T skew in base composition, especially in control regions and protein-coding genes. E. eleusis was supported by bootstrap values of 100%. This study verifies the evolutionary status of E. eleusis in Myodini tribe of Cricetidae at the molecular level. The mitochondrial genome would be a significant supplement for the E. eleusis genetic background.
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spelling pubmed-100889222023-04-12 Sequencing and analysis of the complete mitochondrial genome of Eothenomys eleusis Thomas 1911 from China and its phylogenetic analysis Zhu, Liu Bi, Zhong-Dan Qian, Hong-An Mei, Xiu-Feng Zhao, Jing-Yu Zhao, Xin-Xu Chen, Huan Zhang, Jun-Sheng Piao, Zhong-Wan Mitochondrial DNA B Resour Mitogenome Announcement The complete mitogenome sequence of Eothenomys eleusis Thomas 1911 was determined using PCR. A circular double-stranded structure makes up the mitochondrial genome of E. eleusis. The complete length of the mitochondrial genome is 16,419 bp. The mitochondrial genome of E. eleusis included 13 protein-coding genes, 1 control region, 22 tRNA genes, 2 rRNA genes and 1 origin of L strand replication. The total base composition of E. eleusis mitochondrial genome was A (32.6%), T (26.3%), G (13.6%) and C (27.5%). We found significant A-T skew in base composition, especially in control regions and protein-coding genes. E. eleusis was supported by bootstrap values of 100%. This study verifies the evolutionary status of E. eleusis in Myodini tribe of Cricetidae at the molecular level. The mitochondrial genome would be a significant supplement for the E. eleusis genetic background. Taylor & Francis 2023-04-10 /pmc/articles/PMC10088922/ /pubmed/37057130 http://dx.doi.org/10.1080/23802359.2023.2197087 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent.
spellingShingle Mitogenome Announcement
Zhu, Liu
Bi, Zhong-Dan
Qian, Hong-An
Mei, Xiu-Feng
Zhao, Jing-Yu
Zhao, Xin-Xu
Chen, Huan
Zhang, Jun-Sheng
Piao, Zhong-Wan
Sequencing and analysis of the complete mitochondrial genome of Eothenomys eleusis Thomas 1911 from China and its phylogenetic analysis
title Sequencing and analysis of the complete mitochondrial genome of Eothenomys eleusis Thomas 1911 from China and its phylogenetic analysis
title_full Sequencing and analysis of the complete mitochondrial genome of Eothenomys eleusis Thomas 1911 from China and its phylogenetic analysis
title_fullStr Sequencing and analysis of the complete mitochondrial genome of Eothenomys eleusis Thomas 1911 from China and its phylogenetic analysis
title_full_unstemmed Sequencing and analysis of the complete mitochondrial genome of Eothenomys eleusis Thomas 1911 from China and its phylogenetic analysis
title_short Sequencing and analysis of the complete mitochondrial genome of Eothenomys eleusis Thomas 1911 from China and its phylogenetic analysis
title_sort sequencing and analysis of the complete mitochondrial genome of eothenomys eleusis thomas 1911 from china and its phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10088922/
https://www.ncbi.nlm.nih.gov/pubmed/37057130
http://dx.doi.org/10.1080/23802359.2023.2197087
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