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Prediction models for respiratory outcomes in patients with COVID-19: integration of quantitative computed tomography parameters, demographics, and laboratory features
BACKGROUND: We aimed to develop integrative machine-learning models using quantitative computed tomography (CT) parameters in addition to initial clinical features to predict the respiratory outcomes of coronavirus disease 2019 (COVID-19). METHODS: This was a retrospective study involving 387 patien...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10089866/ https://www.ncbi.nlm.nih.gov/pubmed/37065603 http://dx.doi.org/10.21037/jtd-22-1076 |
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author | Kang, Jieun Kang, Jiyeon Seo, Woo Jung Park, So Hee Kang, Hyung Koo Park, Hye Kyeong Hyun, JongHoon Song, Je Eun Kwak, Yee Gyung Kim, Ki Hwan Kim, Yeon Soo Lee, Sung-Soon Koo, Hyeon-Kyoung |
author_facet | Kang, Jieun Kang, Jiyeon Seo, Woo Jung Park, So Hee Kang, Hyung Koo Park, Hye Kyeong Hyun, JongHoon Song, Je Eun Kwak, Yee Gyung Kim, Ki Hwan Kim, Yeon Soo Lee, Sung-Soon Koo, Hyeon-Kyoung |
author_sort | Kang, Jieun |
collection | PubMed |
description | BACKGROUND: We aimed to develop integrative machine-learning models using quantitative computed tomography (CT) parameters in addition to initial clinical features to predict the respiratory outcomes of coronavirus disease 2019 (COVID-19). METHODS: This was a retrospective study involving 387 patients with COVID-19. Demographic, initial laboratory, and quantitative CT findings were used to develop predictive models of respiratory outcomes. High-attenuation area (HAA) (%) and consolidation (%) were defined as quantified percentages of the area with Hounsfield units between −600 and −250 and between −100 and 0, respectively. Respiratory outcomes were defined as the development of pneumonia, hypoxia, or respiratory failure. Multivariable logistic regression and random forest models were developed for each respiratory outcome. The performance of the logistic regression model was evaluated using the area under the receiver operating characteristic curve (AUC). The accuracy of the developed models was validated by 10-fold cross-validation. RESULTS: A total of 195 (50.4%), 85 (22.0%), and 19 (4.9%) patients developed pneumonia, hypoxia, and respiratory failure, respectively. The mean patient age was 57.8 years, and 194 (50.1%) were female. In the multivariable analysis, vaccination status and levels of lactate dehydrogenase, C-reactive protein (CRP), and fibrinogen were independent predictors of pneumonia. The presence of hypertension, levels of lactate dehydrogenase and CRP, HAA (%), and consolidation (%) were selected as independent variables to predict hypoxia. For respiratory failure, the presence of diabetes, levels of aspartate aminotransferase, and CRP, and HAA (%) were selected. The AUCs of the prediction models for pneumonia, hypoxia, and respiratory failure were 0.904, 0.890, and 0.969, respectively. Using the feature selection in the random forest model, HAA (%) was ranked as one of the top 10 features predicting pneumonia and hypoxia and was first place for respiratory failure. The accuracies of the cross-validation of the random forest models using the top 10 features for pneumonia, hypoxia, and respiratory failure were 0.872, 0.878, and 0.945, respectively. CONCLUSIONS: Our prediction models that incorporated quantitative CT parameters into clinical and laboratory variables showed good performance with high accuracy. |
format | Online Article Text |
id | pubmed-10089866 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-100898662023-04-13 Prediction models for respiratory outcomes in patients with COVID-19: integration of quantitative computed tomography parameters, demographics, and laboratory features Kang, Jieun Kang, Jiyeon Seo, Woo Jung Park, So Hee Kang, Hyung Koo Park, Hye Kyeong Hyun, JongHoon Song, Je Eun Kwak, Yee Gyung Kim, Ki Hwan Kim, Yeon Soo Lee, Sung-Soon Koo, Hyeon-Kyoung J Thorac Dis Original Article on Current Status of Diagnosis and Forecast of COVID-19 BACKGROUND: We aimed to develop integrative machine-learning models using quantitative computed tomography (CT) parameters in addition to initial clinical features to predict the respiratory outcomes of coronavirus disease 2019 (COVID-19). METHODS: This was a retrospective study involving 387 patients with COVID-19. Demographic, initial laboratory, and quantitative CT findings were used to develop predictive models of respiratory outcomes. High-attenuation area (HAA) (%) and consolidation (%) were defined as quantified percentages of the area with Hounsfield units between −600 and −250 and between −100 and 0, respectively. Respiratory outcomes were defined as the development of pneumonia, hypoxia, or respiratory failure. Multivariable logistic regression and random forest models were developed for each respiratory outcome. The performance of the logistic regression model was evaluated using the area under the receiver operating characteristic curve (AUC). The accuracy of the developed models was validated by 10-fold cross-validation. RESULTS: A total of 195 (50.4%), 85 (22.0%), and 19 (4.9%) patients developed pneumonia, hypoxia, and respiratory failure, respectively. The mean patient age was 57.8 years, and 194 (50.1%) were female. In the multivariable analysis, vaccination status and levels of lactate dehydrogenase, C-reactive protein (CRP), and fibrinogen were independent predictors of pneumonia. The presence of hypertension, levels of lactate dehydrogenase and CRP, HAA (%), and consolidation (%) were selected as independent variables to predict hypoxia. For respiratory failure, the presence of diabetes, levels of aspartate aminotransferase, and CRP, and HAA (%) were selected. The AUCs of the prediction models for pneumonia, hypoxia, and respiratory failure were 0.904, 0.890, and 0.969, respectively. Using the feature selection in the random forest model, HAA (%) was ranked as one of the top 10 features predicting pneumonia and hypoxia and was first place for respiratory failure. The accuracies of the cross-validation of the random forest models using the top 10 features for pneumonia, hypoxia, and respiratory failure were 0.872, 0.878, and 0.945, respectively. CONCLUSIONS: Our prediction models that incorporated quantitative CT parameters into clinical and laboratory variables showed good performance with high accuracy. AME Publishing Company 2023-03-09 2023-03-31 /pmc/articles/PMC10089866/ /pubmed/37065603 http://dx.doi.org/10.21037/jtd-22-1076 Text en 2023 Journal of Thoracic Disease. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Original Article on Current Status of Diagnosis and Forecast of COVID-19 Kang, Jieun Kang, Jiyeon Seo, Woo Jung Park, So Hee Kang, Hyung Koo Park, Hye Kyeong Hyun, JongHoon Song, Je Eun Kwak, Yee Gyung Kim, Ki Hwan Kim, Yeon Soo Lee, Sung-Soon Koo, Hyeon-Kyoung Prediction models for respiratory outcomes in patients with COVID-19: integration of quantitative computed tomography parameters, demographics, and laboratory features |
title | Prediction models for respiratory outcomes in patients with COVID-19: integration of quantitative computed tomography parameters, demographics, and laboratory features |
title_full | Prediction models for respiratory outcomes in patients with COVID-19: integration of quantitative computed tomography parameters, demographics, and laboratory features |
title_fullStr | Prediction models for respiratory outcomes in patients with COVID-19: integration of quantitative computed tomography parameters, demographics, and laboratory features |
title_full_unstemmed | Prediction models for respiratory outcomes in patients with COVID-19: integration of quantitative computed tomography parameters, demographics, and laboratory features |
title_short | Prediction models for respiratory outcomes in patients with COVID-19: integration of quantitative computed tomography parameters, demographics, and laboratory features |
title_sort | prediction models for respiratory outcomes in patients with covid-19: integration of quantitative computed tomography parameters, demographics, and laboratory features |
topic | Original Article on Current Status of Diagnosis and Forecast of COVID-19 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10089866/ https://www.ncbi.nlm.nih.gov/pubmed/37065603 http://dx.doi.org/10.21037/jtd-22-1076 |
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