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Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning
Quantification of activity budgets is pivotal for understanding how animals respond to changes in their environment. Social grooming is a key activity that underpins various social processes with consequences for health and fitness. Traditional methods use direct (focal) observations to calculate gr...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10090879/ https://www.ncbi.nlm.nih.gov/pubmed/37063984 http://dx.doi.org/10.1098/rsos.221103 |
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author | Christensen, Charlotte Bracken, Anna M. O'Riain, M. Justin Fehlmann, Gaëlle Holton, Mark Hopkins, Phillip King, Andrew J. Fürtbauer, Ines |
author_facet | Christensen, Charlotte Bracken, Anna M. O'Riain, M. Justin Fehlmann, Gaëlle Holton, Mark Hopkins, Phillip King, Andrew J. Fürtbauer, Ines |
author_sort | Christensen, Charlotte |
collection | PubMed |
description | Quantification of activity budgets is pivotal for understanding how animals respond to changes in their environment. Social grooming is a key activity that underpins various social processes with consequences for health and fitness. Traditional methods use direct (focal) observations to calculate grooming rates, providing systematic but sparse data. Accelerometers, in contrast, can quantify activity budgets continuously but have not been used to quantify social grooming. We test whether grooming can be accurately identified using machine learning (random forest model) trained on labelled acceleration data from wild chacma baboons (Papio ursinus). We successfully identified giving and receiving grooming with high precision (81% and 91%) and recall (87% and 79%). Giving grooming was associated with a distinct rhythmical signal along the surge axis. Receiving grooming had similar acceleration signals to resting, and thus was more difficult to assign. We applied our machine learning model to n = 680 collar data days from n = 12 baboons and found that grooming rates obtained from accelerometers were significantly and positively correlated with direct observation rates for giving but not receiving grooming. The ability to collect continuous grooming data in wild populations will allow researchers to re-examine and expand upon long-standing questions regarding the formation and function of grooming bonds. |
format | Online Article Text |
id | pubmed-10090879 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-100908792023-04-13 Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning Christensen, Charlotte Bracken, Anna M. O'Riain, M. Justin Fehlmann, Gaëlle Holton, Mark Hopkins, Phillip King, Andrew J. Fürtbauer, Ines R Soc Open Sci Organismal and Evolutionary Biology Quantification of activity budgets is pivotal for understanding how animals respond to changes in their environment. Social grooming is a key activity that underpins various social processes with consequences for health and fitness. Traditional methods use direct (focal) observations to calculate grooming rates, providing systematic but sparse data. Accelerometers, in contrast, can quantify activity budgets continuously but have not been used to quantify social grooming. We test whether grooming can be accurately identified using machine learning (random forest model) trained on labelled acceleration data from wild chacma baboons (Papio ursinus). We successfully identified giving and receiving grooming with high precision (81% and 91%) and recall (87% and 79%). Giving grooming was associated with a distinct rhythmical signal along the surge axis. Receiving grooming had similar acceleration signals to resting, and thus was more difficult to assign. We applied our machine learning model to n = 680 collar data days from n = 12 baboons and found that grooming rates obtained from accelerometers were significantly and positively correlated with direct observation rates for giving but not receiving grooming. The ability to collect continuous grooming data in wild populations will allow researchers to re-examine and expand upon long-standing questions regarding the formation and function of grooming bonds. The Royal Society 2023-04-12 /pmc/articles/PMC10090879/ /pubmed/37063984 http://dx.doi.org/10.1098/rsos.221103 Text en © 2023 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Organismal and Evolutionary Biology Christensen, Charlotte Bracken, Anna M. O'Riain, M. Justin Fehlmann, Gaëlle Holton, Mark Hopkins, Phillip King, Andrew J. Fürtbauer, Ines Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning |
title | Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning |
title_full | Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning |
title_fullStr | Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning |
title_full_unstemmed | Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning |
title_short | Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning |
title_sort | quantifying allo-grooming in wild chacma baboons (papio ursinus) using tri-axial acceleration data and machine learning |
topic | Organismal and Evolutionary Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10090879/ https://www.ncbi.nlm.nih.gov/pubmed/37063984 http://dx.doi.org/10.1098/rsos.221103 |
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