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Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning

Quantification of activity budgets is pivotal for understanding how animals respond to changes in their environment. Social grooming is a key activity that underpins various social processes with consequences for health and fitness. Traditional methods use direct (focal) observations to calculate gr...

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Autores principales: Christensen, Charlotte, Bracken, Anna M., O'Riain, M. Justin, Fehlmann, Gaëlle, Holton, Mark, Hopkins, Phillip, King, Andrew J., Fürtbauer, Ines
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10090879/
https://www.ncbi.nlm.nih.gov/pubmed/37063984
http://dx.doi.org/10.1098/rsos.221103
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author Christensen, Charlotte
Bracken, Anna M.
O'Riain, M. Justin
Fehlmann, Gaëlle
Holton, Mark
Hopkins, Phillip
King, Andrew J.
Fürtbauer, Ines
author_facet Christensen, Charlotte
Bracken, Anna M.
O'Riain, M. Justin
Fehlmann, Gaëlle
Holton, Mark
Hopkins, Phillip
King, Andrew J.
Fürtbauer, Ines
author_sort Christensen, Charlotte
collection PubMed
description Quantification of activity budgets is pivotal for understanding how animals respond to changes in their environment. Social grooming is a key activity that underpins various social processes with consequences for health and fitness. Traditional methods use direct (focal) observations to calculate grooming rates, providing systematic but sparse data. Accelerometers, in contrast, can quantify activity budgets continuously but have not been used to quantify social grooming. We test whether grooming can be accurately identified using machine learning (random forest model) trained on labelled acceleration data from wild chacma baboons (Papio ursinus). We successfully identified giving and receiving grooming with high precision (81% and 91%) and recall (87% and 79%). Giving grooming was associated with a distinct rhythmical signal along the surge axis. Receiving grooming had similar acceleration signals to resting, and thus was more difficult to assign. We applied our machine learning model to n = 680 collar data days from n = 12 baboons and found that grooming rates obtained from accelerometers were significantly and positively correlated with direct observation rates for giving but not receiving grooming. The ability to collect continuous grooming data in wild populations will allow researchers to re-examine and expand upon long-standing questions regarding the formation and function of grooming bonds.
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spelling pubmed-100908792023-04-13 Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning Christensen, Charlotte Bracken, Anna M. O'Riain, M. Justin Fehlmann, Gaëlle Holton, Mark Hopkins, Phillip King, Andrew J. Fürtbauer, Ines R Soc Open Sci Organismal and Evolutionary Biology Quantification of activity budgets is pivotal for understanding how animals respond to changes in their environment. Social grooming is a key activity that underpins various social processes with consequences for health and fitness. Traditional methods use direct (focal) observations to calculate grooming rates, providing systematic but sparse data. Accelerometers, in contrast, can quantify activity budgets continuously but have not been used to quantify social grooming. We test whether grooming can be accurately identified using machine learning (random forest model) trained on labelled acceleration data from wild chacma baboons (Papio ursinus). We successfully identified giving and receiving grooming with high precision (81% and 91%) and recall (87% and 79%). Giving grooming was associated with a distinct rhythmical signal along the surge axis. Receiving grooming had similar acceleration signals to resting, and thus was more difficult to assign. We applied our machine learning model to n = 680 collar data days from n = 12 baboons and found that grooming rates obtained from accelerometers were significantly and positively correlated with direct observation rates for giving but not receiving grooming. The ability to collect continuous grooming data in wild populations will allow researchers to re-examine and expand upon long-standing questions regarding the formation and function of grooming bonds. The Royal Society 2023-04-12 /pmc/articles/PMC10090879/ /pubmed/37063984 http://dx.doi.org/10.1098/rsos.221103 Text en © 2023 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited.
spellingShingle Organismal and Evolutionary Biology
Christensen, Charlotte
Bracken, Anna M.
O'Riain, M. Justin
Fehlmann, Gaëlle
Holton, Mark
Hopkins, Phillip
King, Andrew J.
Fürtbauer, Ines
Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning
title Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning
title_full Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning
title_fullStr Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning
title_full_unstemmed Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning
title_short Quantifying allo-grooming in wild chacma baboons (Papio ursinus) using tri-axial acceleration data and machine learning
title_sort quantifying allo-grooming in wild chacma baboons (papio ursinus) using tri-axial acceleration data and machine learning
topic Organismal and Evolutionary Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10090879/
https://www.ncbi.nlm.nih.gov/pubmed/37063984
http://dx.doi.org/10.1098/rsos.221103
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