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Predictive modeling using shape statistics for interpretable and robust quality assurance of automated contours in radiation treatment planning
Deep learning methods for image segmentation and contouring are gaining prominence as an automated approach for delineating anatomical structures in medical images during radiation treatment planning. These contours are used to guide radiotherapy treatment planning, so it is important that contourin...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10091357/ https://www.ncbi.nlm.nih.gov/pubmed/36540994 |
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author | Wooten, Zachary T. Yu, Cenji Court, Laurence E. Peterson, Christine B. |
author_facet | Wooten, Zachary T. Yu, Cenji Court, Laurence E. Peterson, Christine B. |
author_sort | Wooten, Zachary T. |
collection | PubMed |
description | Deep learning methods for image segmentation and contouring are gaining prominence as an automated approach for delineating anatomical structures in medical images during radiation treatment planning. These contours are used to guide radiotherapy treatment planning, so it is important that contouring errors are flagged before they are used for planning. This creates a need for effective quality assurance methods to enable the clinical use of automated contours in radiotherapy. We propose a novel method for contour quality assurance that requires only shape features, making it independent of the platform used to obtain the images. Our method uses a random forest classifier to identify low-quality contours. On a dataset of 312 kidney contours, our method achieved a cross-validated area under the curve of 0.937 in identifying unacceptable contours. We applied our method to an unlabeled validation dataset of 36 kidney contours. We flagged 6 contours which were then reviewed by a cervix contour specialist, who found that 4 of the 6 contours contained errors. We used Shapley values to characterize the specific shape features that contributed to each contour being flagged, providing a starting point for characterizing the source of the contouring error. These promising results suggest our method is feasible for quality assurance of automated radiotherapy contours. |
format | Online Article Text |
id | pubmed-10091357 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
record_format | MEDLINE/PubMed |
spelling | pubmed-100913572023-04-12 Predictive modeling using shape statistics for interpretable and robust quality assurance of automated contours in radiation treatment planning Wooten, Zachary T. Yu, Cenji Court, Laurence E. Peterson, Christine B. Pac Symp Biocomput Article Deep learning methods for image segmentation and contouring are gaining prominence as an automated approach for delineating anatomical structures in medical images during radiation treatment planning. These contours are used to guide radiotherapy treatment planning, so it is important that contouring errors are flagged before they are used for planning. This creates a need for effective quality assurance methods to enable the clinical use of automated contours in radiotherapy. We propose a novel method for contour quality assurance that requires only shape features, making it independent of the platform used to obtain the images. Our method uses a random forest classifier to identify low-quality contours. On a dataset of 312 kidney contours, our method achieved a cross-validated area under the curve of 0.937 in identifying unacceptable contours. We applied our method to an unlabeled validation dataset of 36 kidney contours. We flagged 6 contours which were then reviewed by a cervix contour specialist, who found that 4 of the 6 contours contained errors. We used Shapley values to characterize the specific shape features that contributed to each contour being flagged, providing a starting point for characterizing the source of the contouring error. These promising results suggest our method is feasible for quality assurance of automated radiotherapy contours. 2023 /pmc/articles/PMC10091357/ /pubmed/36540994 Text en https://creativecommons.org/licenses/by-nc/4.0/Open Access chapter published by World Scientific Publishing Company and distributed under the terms of the Creative Commons Attribution Non-Commercial (CC BY-NC) 4.0 License. |
spellingShingle | Article Wooten, Zachary T. Yu, Cenji Court, Laurence E. Peterson, Christine B. Predictive modeling using shape statistics for interpretable and robust quality assurance of automated contours in radiation treatment planning |
title | Predictive modeling using shape statistics for interpretable and robust quality assurance of automated contours in radiation treatment planning |
title_full | Predictive modeling using shape statistics for interpretable and robust quality assurance of automated contours in radiation treatment planning |
title_fullStr | Predictive modeling using shape statistics for interpretable and robust quality assurance of automated contours in radiation treatment planning |
title_full_unstemmed | Predictive modeling using shape statistics for interpretable and robust quality assurance of automated contours in radiation treatment planning |
title_short | Predictive modeling using shape statistics for interpretable and robust quality assurance of automated contours in radiation treatment planning |
title_sort | predictive modeling using shape statistics for interpretable and robust quality assurance of automated contours in radiation treatment planning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10091357/ https://www.ncbi.nlm.nih.gov/pubmed/36540994 |
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