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Radiologic versus Segmentation Measurements to Quantify Wilms Tumor Volume on MRI in Pediatric Patients
SIMPLE SUMMARY: Volume measurements are important in tumor evaluations of children with a Wilms tumor. Current volume measurements might not be accurate. Our study had two aims. Our first aim was to assess whether manual segmentation of MRI can accurately quantify the volume of Wilms tumors. Our sec...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10092966/ https://www.ncbi.nlm.nih.gov/pubmed/37046776 http://dx.doi.org/10.3390/cancers15072115 |
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author | Buser, Myrthe A. D. van der Steeg, Alida F. W. Wijnen, Marc H. W. A. Fitski, Matthijs van Tinteren, Harm van den Heuvel-Eibrink, Marry M. Littooij, Annemieke S. van der Velden, Bas H. M. |
author_facet | Buser, Myrthe A. D. van der Steeg, Alida F. W. Wijnen, Marc H. W. A. Fitski, Matthijs van Tinteren, Harm van den Heuvel-Eibrink, Marry M. Littooij, Annemieke S. van der Velden, Bas H. M. |
author_sort | Buser, Myrthe A. D. |
collection | PubMed |
description | SIMPLE SUMMARY: Volume measurements are important in tumor evaluations of children with a Wilms tumor. Current volume measurements might not be accurate. Our study had two aims. Our first aim was to assess whether manual segmentation of MRI can accurately quantify the volume of Wilms tumors. Our second aim was to show if manual segmentation can be automated using deep learning. We compared radiological-based and manual segmentation-based measurements. Next, we developed an automated segmentation method. Radiological measurements underestimate the actual tumor volume by about 10% irrespective of tumor size. Deep learning can potentially be used to replace manual segmentations in volume measurements. ABSTRACT: Wilms tumor is a common pediatric solid tumor. To evaluate tumor response to chemotherapy and decide whether nephron-sparing surgery is possible, tumor volume measurements based on magnetic resonance imaging (MRI) are important. Currently, radiological volume measurements are based on measuring tumor dimensions in three directions. Manual segmentation-based volume measurements might be more accurate, but this process is time-consuming and user-dependent. The aim of this study was to investigate whether manual segmentation-based volume measurements are more accurate and to explore whether these segmentations can be automated using deep learning. We included the MRI images of 45 Wilms tumor patients (age 0–18 years). First, we compared radiological tumor volumes with manual segmentation-based tumor volume measurements. Next, we created an automated segmentation method by training a nnU-Net in a five-fold cross-validation. Segmentation quality was validated by comparing the automated segmentation with the manually created ground truth segmentations, using Dice scores and the 95th percentile of the Hausdorff distances (HD95). On average, manual tumor segmentations result in larger tumor volumes. For automated segmentation, the median dice was 0.90. The median HD95 was 7.2 mm. We showed that radiological volume measurements underestimated tumor volume by about 10% when compared to manual segmentation-based volume measurements. Deep learning can potentially be used to replace manual segmentation to benefit from accurate volume measurements without time and observer constraints. |
format | Online Article Text |
id | pubmed-10092966 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-100929662023-04-13 Radiologic versus Segmentation Measurements to Quantify Wilms Tumor Volume on MRI in Pediatric Patients Buser, Myrthe A. D. van der Steeg, Alida F. W. Wijnen, Marc H. W. A. Fitski, Matthijs van Tinteren, Harm van den Heuvel-Eibrink, Marry M. Littooij, Annemieke S. van der Velden, Bas H. M. Cancers (Basel) Article SIMPLE SUMMARY: Volume measurements are important in tumor evaluations of children with a Wilms tumor. Current volume measurements might not be accurate. Our study had two aims. Our first aim was to assess whether manual segmentation of MRI can accurately quantify the volume of Wilms tumors. Our second aim was to show if manual segmentation can be automated using deep learning. We compared radiological-based and manual segmentation-based measurements. Next, we developed an automated segmentation method. Radiological measurements underestimate the actual tumor volume by about 10% irrespective of tumor size. Deep learning can potentially be used to replace manual segmentations in volume measurements. ABSTRACT: Wilms tumor is a common pediatric solid tumor. To evaluate tumor response to chemotherapy and decide whether nephron-sparing surgery is possible, tumor volume measurements based on magnetic resonance imaging (MRI) are important. Currently, radiological volume measurements are based on measuring tumor dimensions in three directions. Manual segmentation-based volume measurements might be more accurate, but this process is time-consuming and user-dependent. The aim of this study was to investigate whether manual segmentation-based volume measurements are more accurate and to explore whether these segmentations can be automated using deep learning. We included the MRI images of 45 Wilms tumor patients (age 0–18 years). First, we compared radiological tumor volumes with manual segmentation-based tumor volume measurements. Next, we created an automated segmentation method by training a nnU-Net in a five-fold cross-validation. Segmentation quality was validated by comparing the automated segmentation with the manually created ground truth segmentations, using Dice scores and the 95th percentile of the Hausdorff distances (HD95). On average, manual tumor segmentations result in larger tumor volumes. For automated segmentation, the median dice was 0.90. The median HD95 was 7.2 mm. We showed that radiological volume measurements underestimated tumor volume by about 10% when compared to manual segmentation-based volume measurements. Deep learning can potentially be used to replace manual segmentation to benefit from accurate volume measurements without time and observer constraints. MDPI 2023-04-01 /pmc/articles/PMC10092966/ /pubmed/37046776 http://dx.doi.org/10.3390/cancers15072115 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Buser, Myrthe A. D. van der Steeg, Alida F. W. Wijnen, Marc H. W. A. Fitski, Matthijs van Tinteren, Harm van den Heuvel-Eibrink, Marry M. Littooij, Annemieke S. van der Velden, Bas H. M. Radiologic versus Segmentation Measurements to Quantify Wilms Tumor Volume on MRI in Pediatric Patients |
title | Radiologic versus Segmentation Measurements to Quantify Wilms Tumor Volume on MRI in Pediatric Patients |
title_full | Radiologic versus Segmentation Measurements to Quantify Wilms Tumor Volume on MRI in Pediatric Patients |
title_fullStr | Radiologic versus Segmentation Measurements to Quantify Wilms Tumor Volume on MRI in Pediatric Patients |
title_full_unstemmed | Radiologic versus Segmentation Measurements to Quantify Wilms Tumor Volume on MRI in Pediatric Patients |
title_short | Radiologic versus Segmentation Measurements to Quantify Wilms Tumor Volume on MRI in Pediatric Patients |
title_sort | radiologic versus segmentation measurements to quantify wilms tumor volume on mri in pediatric patients |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10092966/ https://www.ncbi.nlm.nih.gov/pubmed/37046776 http://dx.doi.org/10.3390/cancers15072115 |
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