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Weighted Average Ensemble Deep Learning Model for Stratification of Brain Tumor in MRI Images

Brain tumor diagnosis at an early stage can improve the chances of successful treatment and better patient outcomes. In the biomedical industry, non-invasive diagnostic procedures, such as magnetic resonance imaging (MRI), can be used to diagnose brain tumors. Deep learning, a type of artificial int...

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Autores principales: Anand, Vatsala, Gupta, Sheifali, Gupta, Deepali, Gulzar, Yonis, Xin, Qin, Juneja, Sapna, Shah, Asadullah, Shaikh, Asadullah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10093740/
https://www.ncbi.nlm.nih.gov/pubmed/37046538
http://dx.doi.org/10.3390/diagnostics13071320
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author Anand, Vatsala
Gupta, Sheifali
Gupta, Deepali
Gulzar, Yonis
Xin, Qin
Juneja, Sapna
Shah, Asadullah
Shaikh, Asadullah
author_facet Anand, Vatsala
Gupta, Sheifali
Gupta, Deepali
Gulzar, Yonis
Xin, Qin
Juneja, Sapna
Shah, Asadullah
Shaikh, Asadullah
author_sort Anand, Vatsala
collection PubMed
description Brain tumor diagnosis at an early stage can improve the chances of successful treatment and better patient outcomes. In the biomedical industry, non-invasive diagnostic procedures, such as magnetic resonance imaging (MRI), can be used to diagnose brain tumors. Deep learning, a type of artificial intelligence, can analyze MRI images in a matter of seconds, reducing the time it takes for diagnosis and potentially improving patient outcomes. Furthermore, an ensemble model can help increase the accuracy of classification by combining the strengths of multiple models and compensating for their individual weaknesses. Therefore, in this research, a weighted average ensemble deep learning model is proposed for the classification of brain tumors. For the weighted ensemble classification model, three different feature spaces are taken from the transfer learning VGG19 model, Convolution Neural Network (CNN) model without augmentation, and CNN model with augmentation. These three feature spaces are ensembled with the best combination of weights, i.e., weight1, weight2, and weight3 by using grid search. The dataset used for simulation is taken from The Cancer Genome Atlas (TCGA), having a lower-grade glioma collection with 3929 MRI images of 110 patients. The ensemble model helps reduce overfitting by combining multiple models that have learned different aspects of the data. The proposed ensemble model outperforms the three individual models for detecting brain tumors in terms of accuracy, precision, and F1-score. Therefore, the proposed model can act as a second opinion tool for radiologists to diagnose the tumor from MRI images of the brain.
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spelling pubmed-100937402023-04-13 Weighted Average Ensemble Deep Learning Model for Stratification of Brain Tumor in MRI Images Anand, Vatsala Gupta, Sheifali Gupta, Deepali Gulzar, Yonis Xin, Qin Juneja, Sapna Shah, Asadullah Shaikh, Asadullah Diagnostics (Basel) Article Brain tumor diagnosis at an early stage can improve the chances of successful treatment and better patient outcomes. In the biomedical industry, non-invasive diagnostic procedures, such as magnetic resonance imaging (MRI), can be used to diagnose brain tumors. Deep learning, a type of artificial intelligence, can analyze MRI images in a matter of seconds, reducing the time it takes for diagnosis and potentially improving patient outcomes. Furthermore, an ensemble model can help increase the accuracy of classification by combining the strengths of multiple models and compensating for their individual weaknesses. Therefore, in this research, a weighted average ensemble deep learning model is proposed for the classification of brain tumors. For the weighted ensemble classification model, three different feature spaces are taken from the transfer learning VGG19 model, Convolution Neural Network (CNN) model without augmentation, and CNN model with augmentation. These three feature spaces are ensembled with the best combination of weights, i.e., weight1, weight2, and weight3 by using grid search. The dataset used for simulation is taken from The Cancer Genome Atlas (TCGA), having a lower-grade glioma collection with 3929 MRI images of 110 patients. The ensemble model helps reduce overfitting by combining multiple models that have learned different aspects of the data. The proposed ensemble model outperforms the three individual models for detecting brain tumors in terms of accuracy, precision, and F1-score. Therefore, the proposed model can act as a second opinion tool for radiologists to diagnose the tumor from MRI images of the brain. MDPI 2023-04-02 /pmc/articles/PMC10093740/ /pubmed/37046538 http://dx.doi.org/10.3390/diagnostics13071320 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Anand, Vatsala
Gupta, Sheifali
Gupta, Deepali
Gulzar, Yonis
Xin, Qin
Juneja, Sapna
Shah, Asadullah
Shaikh, Asadullah
Weighted Average Ensemble Deep Learning Model for Stratification of Brain Tumor in MRI Images
title Weighted Average Ensemble Deep Learning Model for Stratification of Brain Tumor in MRI Images
title_full Weighted Average Ensemble Deep Learning Model for Stratification of Brain Tumor in MRI Images
title_fullStr Weighted Average Ensemble Deep Learning Model for Stratification of Brain Tumor in MRI Images
title_full_unstemmed Weighted Average Ensemble Deep Learning Model for Stratification of Brain Tumor in MRI Images
title_short Weighted Average Ensemble Deep Learning Model for Stratification of Brain Tumor in MRI Images
title_sort weighted average ensemble deep learning model for stratification of brain tumor in mri images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10093740/
https://www.ncbi.nlm.nih.gov/pubmed/37046538
http://dx.doi.org/10.3390/diagnostics13071320
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