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Recent Theoretical Insights into the Oxidative Degradation of Biopolymers and Plastics by Metalloenzymes †
Molecular modeling techniques have become indispensable in many fields of molecular sciences in which the details related to mechanisms and reactivity need to be studied at an atomistic level. This review article provides a collection of computational modeling works on a topic of enormous interest a...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10094197/ https://www.ncbi.nlm.nih.gov/pubmed/37047341 http://dx.doi.org/10.3390/ijms24076368 |
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author | Rovaletti, Anna De Gioia, Luca Fantucci, Piercarlo Greco, Claudio Vertemara, Jacopo Zampella, Giuseppe Arrigoni, Federica Bertini, Luca |
author_facet | Rovaletti, Anna De Gioia, Luca Fantucci, Piercarlo Greco, Claudio Vertemara, Jacopo Zampella, Giuseppe Arrigoni, Federica Bertini, Luca |
author_sort | Rovaletti, Anna |
collection | PubMed |
description | Molecular modeling techniques have become indispensable in many fields of molecular sciences in which the details related to mechanisms and reactivity need to be studied at an atomistic level. This review article provides a collection of computational modeling works on a topic of enormous interest and urgent relevance: the properties of metalloenzymes involved in the degradation and valorization of natural biopolymers and synthetic plastics on the basis of both circular biofuel production and bioremediation strategies. In particular, we will focus on lytic polysaccharide monooxygenase, laccases, and various heme peroxidases involved in the processing of polysaccharides, lignins, rubbers, and some synthetic polymers. Special attention will be dedicated to the interaction between these enzymes and their substrate studied at different levels of theory, starting from classical molecular docking and molecular dynamics techniques up to techniques based on quantum chemistry. |
format | Online Article Text |
id | pubmed-10094197 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-100941972023-04-13 Recent Theoretical Insights into the Oxidative Degradation of Biopolymers and Plastics by Metalloenzymes † Rovaletti, Anna De Gioia, Luca Fantucci, Piercarlo Greco, Claudio Vertemara, Jacopo Zampella, Giuseppe Arrigoni, Federica Bertini, Luca Int J Mol Sci Review Molecular modeling techniques have become indispensable in many fields of molecular sciences in which the details related to mechanisms and reactivity need to be studied at an atomistic level. This review article provides a collection of computational modeling works on a topic of enormous interest and urgent relevance: the properties of metalloenzymes involved in the degradation and valorization of natural biopolymers and synthetic plastics on the basis of both circular biofuel production and bioremediation strategies. In particular, we will focus on lytic polysaccharide monooxygenase, laccases, and various heme peroxidases involved in the processing of polysaccharides, lignins, rubbers, and some synthetic polymers. Special attention will be dedicated to the interaction between these enzymes and their substrate studied at different levels of theory, starting from classical molecular docking and molecular dynamics techniques up to techniques based on quantum chemistry. MDPI 2023-03-28 /pmc/articles/PMC10094197/ /pubmed/37047341 http://dx.doi.org/10.3390/ijms24076368 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Rovaletti, Anna De Gioia, Luca Fantucci, Piercarlo Greco, Claudio Vertemara, Jacopo Zampella, Giuseppe Arrigoni, Federica Bertini, Luca Recent Theoretical Insights into the Oxidative Degradation of Biopolymers and Plastics by Metalloenzymes † |
title | Recent Theoretical Insights into the Oxidative Degradation of Biopolymers and Plastics by Metalloenzymes † |
title_full | Recent Theoretical Insights into the Oxidative Degradation of Biopolymers and Plastics by Metalloenzymes † |
title_fullStr | Recent Theoretical Insights into the Oxidative Degradation of Biopolymers and Plastics by Metalloenzymes † |
title_full_unstemmed | Recent Theoretical Insights into the Oxidative Degradation of Biopolymers and Plastics by Metalloenzymes † |
title_short | Recent Theoretical Insights into the Oxidative Degradation of Biopolymers and Plastics by Metalloenzymes † |
title_sort | recent theoretical insights into the oxidative degradation of biopolymers and plastics by metalloenzymes † |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10094197/ https://www.ncbi.nlm.nih.gov/pubmed/37047341 http://dx.doi.org/10.3390/ijms24076368 |
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