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LTR Retroelements and Bird Adaptation to Arid Environments

TEs are known to be among the main drivers in genome evolution, leading to the generation of evolutionary advantages that favor the success of organisms. The aim of this work was to investigate the TE landscape in bird genomes to look for a possible relationship between the amount of specific TE typ...

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Autores principales: Carotti, Elisa, Tittarelli, Edith, Canapa, Adriana, Biscotti, Maria Assunta, Carducci, Federica, Barucca, Marco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10094322/
https://www.ncbi.nlm.nih.gov/pubmed/37047324
http://dx.doi.org/10.3390/ijms24076332
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author Carotti, Elisa
Tittarelli, Edith
Canapa, Adriana
Biscotti, Maria Assunta
Carducci, Federica
Barucca, Marco
author_facet Carotti, Elisa
Tittarelli, Edith
Canapa, Adriana
Biscotti, Maria Assunta
Carducci, Federica
Barucca, Marco
author_sort Carotti, Elisa
collection PubMed
description TEs are known to be among the main drivers in genome evolution, leading to the generation of evolutionary advantages that favor the success of organisms. The aim of this work was to investigate the TE landscape in bird genomes to look for a possible relationship between the amount of specific TE types and environmental changes that characterized the Oligocene era in Australia. Therefore, the mobilome of 29 bird species, belonging to a total of 11 orders, was analyzed. Our results confirmed that LINE retroelements are not predominant in all species of this evolutionary lineage and highlighted an LTR retroelement dominance in species with an Australian-related evolutionary history. The bird LTR retroelement expansion might have happened in response to the Earth’s dramatic climate changes that occurred about 30 Mya, followed by a progressive aridification across most of Australian landmasses. Therefore, in birds, LTR retroelement burst might have represented an evolutionary advantage in the adaptation to arid/drought environments.
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spelling pubmed-100943222023-04-13 LTR Retroelements and Bird Adaptation to Arid Environments Carotti, Elisa Tittarelli, Edith Canapa, Adriana Biscotti, Maria Assunta Carducci, Federica Barucca, Marco Int J Mol Sci Article TEs are known to be among the main drivers in genome evolution, leading to the generation of evolutionary advantages that favor the success of organisms. The aim of this work was to investigate the TE landscape in bird genomes to look for a possible relationship between the amount of specific TE types and environmental changes that characterized the Oligocene era in Australia. Therefore, the mobilome of 29 bird species, belonging to a total of 11 orders, was analyzed. Our results confirmed that LINE retroelements are not predominant in all species of this evolutionary lineage and highlighted an LTR retroelement dominance in species with an Australian-related evolutionary history. The bird LTR retroelement expansion might have happened in response to the Earth’s dramatic climate changes that occurred about 30 Mya, followed by a progressive aridification across most of Australian landmasses. Therefore, in birds, LTR retroelement burst might have represented an evolutionary advantage in the adaptation to arid/drought environments. MDPI 2023-03-28 /pmc/articles/PMC10094322/ /pubmed/37047324 http://dx.doi.org/10.3390/ijms24076332 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Carotti, Elisa
Tittarelli, Edith
Canapa, Adriana
Biscotti, Maria Assunta
Carducci, Federica
Barucca, Marco
LTR Retroelements and Bird Adaptation to Arid Environments
title LTR Retroelements and Bird Adaptation to Arid Environments
title_full LTR Retroelements and Bird Adaptation to Arid Environments
title_fullStr LTR Retroelements and Bird Adaptation to Arid Environments
title_full_unstemmed LTR Retroelements and Bird Adaptation to Arid Environments
title_short LTR Retroelements and Bird Adaptation to Arid Environments
title_sort ltr retroelements and bird adaptation to arid environments
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10094322/
https://www.ncbi.nlm.nih.gov/pubmed/37047324
http://dx.doi.org/10.3390/ijms24076332
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