Cargando…

Improved U-net-based leukocyte segmentation method

SIGNIFICANCE: Leukocytes are mainly composed of neutrophils, basophils, eosinophils, monocytes, and lymphocytes. The number and proportion of different types of leukocytes correspond to different diseases, so an accurate segmentation of each type of leukocyte is important for the diagnosis of diseas...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhu, Mengjing, Chen, Wei, Sun, Yi, Li, Zhaohui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Society of Photo-Optical Instrumentation Engineers 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10095536/
https://www.ncbi.nlm.nih.gov/pubmed/37065646
http://dx.doi.org/10.1117/1.JBO.28.4.045002
_version_ 1785024107348230144
author Zhu, Mengjing
Chen, Wei
Sun, Yi
Li, Zhaohui
author_facet Zhu, Mengjing
Chen, Wei
Sun, Yi
Li, Zhaohui
author_sort Zhu, Mengjing
collection PubMed
description SIGNIFICANCE: Leukocytes are mainly composed of neutrophils, basophils, eosinophils, monocytes, and lymphocytes. The number and proportion of different types of leukocytes correspond to different diseases, so an accurate segmentation of each type of leukocyte is important for the diagnosis of disease. However, the acquisition of blood cell images can be affected by external environmental factors, which can lead to variable light and darkness, complex backgrounds, and poorly characterized leukocytes. AIM: To address the problem of complex blood cell images collected under different environments and the lack of obvious leukocyte features, a leukocyte segmentation method based on improved U-net is proposed. APPROACH: First, adaptive histogram equalization-retinex correction was introduced for data enhancement to make the leukocyte features in the blood cell images clearer. Then, to address the problem of similarity between different types of leukocytes, convolutional block attention module is added to the four skip connections of U-net to focus the features from spatial and channel aspects, so that the network can quickly locate the high-value information of features in different channels and spaces. It avoids the problem of large amount of repeated computation of low-value information, prevents overfitting, and improves the training efficiency and generalization ability of the network. Finally, to solve the problem of class imbalance in blood cell images and to better segment the cytoplasm of leukocytes, a loss function combining focal loss and Dice loss is proposed. RESULTS: We use the BCISC public dataset to verify the effectiveness of the proposed method. The segmentation of multiple leukocytes using the method of this paper can achieve 99.53% accuracy and 91.89% mIoU. CONCLUSIONS: The experimental results show that the method achieves good segmentation results for lymphocytes, basophils, neutrophils, eosinophils, and monocytes.
format Online
Article
Text
id pubmed-10095536
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Society of Photo-Optical Instrumentation Engineers
record_format MEDLINE/PubMed
spelling pubmed-100955362023-04-13 Improved U-net-based leukocyte segmentation method Zhu, Mengjing Chen, Wei Sun, Yi Li, Zhaohui J Biomed Opt General SIGNIFICANCE: Leukocytes are mainly composed of neutrophils, basophils, eosinophils, monocytes, and lymphocytes. The number and proportion of different types of leukocytes correspond to different diseases, so an accurate segmentation of each type of leukocyte is important for the diagnosis of disease. However, the acquisition of blood cell images can be affected by external environmental factors, which can lead to variable light and darkness, complex backgrounds, and poorly characterized leukocytes. AIM: To address the problem of complex blood cell images collected under different environments and the lack of obvious leukocyte features, a leukocyte segmentation method based on improved U-net is proposed. APPROACH: First, adaptive histogram equalization-retinex correction was introduced for data enhancement to make the leukocyte features in the blood cell images clearer. Then, to address the problem of similarity between different types of leukocytes, convolutional block attention module is added to the four skip connections of U-net to focus the features from spatial and channel aspects, so that the network can quickly locate the high-value information of features in different channels and spaces. It avoids the problem of large amount of repeated computation of low-value information, prevents overfitting, and improves the training efficiency and generalization ability of the network. Finally, to solve the problem of class imbalance in blood cell images and to better segment the cytoplasm of leukocytes, a loss function combining focal loss and Dice loss is proposed. RESULTS: We use the BCISC public dataset to verify the effectiveness of the proposed method. The segmentation of multiple leukocytes using the method of this paper can achieve 99.53% accuracy and 91.89% mIoU. CONCLUSIONS: The experimental results show that the method achieves good segmentation results for lymphocytes, basophils, neutrophils, eosinophils, and monocytes. Society of Photo-Optical Instrumentation Engineers 2023-04-12 2023-04 /pmc/articles/PMC10095536/ /pubmed/37065646 http://dx.doi.org/10.1117/1.JBO.28.4.045002 Text en © 2023 The Authors https://creativecommons.org/licenses/by/4.0/Published by SPIE under a Creative Commons Attribution 4.0 International License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.
spellingShingle General
Zhu, Mengjing
Chen, Wei
Sun, Yi
Li, Zhaohui
Improved U-net-based leukocyte segmentation method
title Improved U-net-based leukocyte segmentation method
title_full Improved U-net-based leukocyte segmentation method
title_fullStr Improved U-net-based leukocyte segmentation method
title_full_unstemmed Improved U-net-based leukocyte segmentation method
title_short Improved U-net-based leukocyte segmentation method
title_sort improved u-net-based leukocyte segmentation method
topic General
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10095536/
https://www.ncbi.nlm.nih.gov/pubmed/37065646
http://dx.doi.org/10.1117/1.JBO.28.4.045002
work_keys_str_mv AT zhumengjing improvedunetbasedleukocytesegmentationmethod
AT chenwei improvedunetbasedleukocytesegmentationmethod
AT sunyi improvedunetbasedleukocytesegmentationmethod
AT lizhaohui improvedunetbasedleukocytesegmentationmethod