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MAM: Flexible Monte-Carlo Agent based model for modelling COVID-19 spread

In the three years since SARS-CoV-2 was first detected in China, hundreds of millions of people have been infected and millions have died. Along with the immediate need for treatment solutions, the COVID-19 epidemic has reinforced the need for mathematical models that can predict the spread of the p...

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Detalles Bibliográficos
Autores principales: De-Leon, Hilla, Aran, Dvir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10098313/
https://www.ncbi.nlm.nih.gov/pubmed/37061013
http://dx.doi.org/10.1016/j.jbi.2023.104364
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author De-Leon, Hilla
Aran, Dvir
author_facet De-Leon, Hilla
Aran, Dvir
author_sort De-Leon, Hilla
collection PubMed
description In the three years since SARS-CoV-2 was first detected in China, hundreds of millions of people have been infected and millions have died. Along with the immediate need for treatment solutions, the COVID-19 epidemic has reinforced the need for mathematical models that can predict the spread of the pandemic in an ever-changing environment. The susceptible-infectious-removed (SIR) model has been widely used to model COVID-19 transmission, however, with limited success. Here, we present a novel, dynamic Monte-Carlo Agent-based Model (MAM), which is based on the basic principles of statistical physics. Using public aggregative data from Israel on three major outbreaks, we compare predictions made by SIR and MAM, and show that MAM outperforms SIR in all aspects. Furthermore, MAM is a flexible model and allows to accurately examine the effects of vaccinations in different subgroups, and the effects of the introduction of new variants.
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spelling pubmed-100983132023-04-13 MAM: Flexible Monte-Carlo Agent based model for modelling COVID-19 spread De-Leon, Hilla Aran, Dvir J Biomed Inform Original Research In the three years since SARS-CoV-2 was first detected in China, hundreds of millions of people have been infected and millions have died. Along with the immediate need for treatment solutions, the COVID-19 epidemic has reinforced the need for mathematical models that can predict the spread of the pandemic in an ever-changing environment. The susceptible-infectious-removed (SIR) model has been widely used to model COVID-19 transmission, however, with limited success. Here, we present a novel, dynamic Monte-Carlo Agent-based Model (MAM), which is based on the basic principles of statistical physics. Using public aggregative data from Israel on three major outbreaks, we compare predictions made by SIR and MAM, and show that MAM outperforms SIR in all aspects. Furthermore, MAM is a flexible model and allows to accurately examine the effects of vaccinations in different subgroups, and the effects of the introduction of new variants. Elsevier Inc. 2023-05 2023-04-13 /pmc/articles/PMC10098313/ /pubmed/37061013 http://dx.doi.org/10.1016/j.jbi.2023.104364 Text en © 2023 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Original Research
De-Leon, Hilla
Aran, Dvir
MAM: Flexible Monte-Carlo Agent based model for modelling COVID-19 spread
title MAM: Flexible Monte-Carlo Agent based model for modelling COVID-19 spread
title_full MAM: Flexible Monte-Carlo Agent based model for modelling COVID-19 spread
title_fullStr MAM: Flexible Monte-Carlo Agent based model for modelling COVID-19 spread
title_full_unstemmed MAM: Flexible Monte-Carlo Agent based model for modelling COVID-19 spread
title_short MAM: Flexible Monte-Carlo Agent based model for modelling COVID-19 spread
title_sort mam: flexible monte-carlo agent based model for modelling covid-19 spread
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10098313/
https://www.ncbi.nlm.nih.gov/pubmed/37061013
http://dx.doi.org/10.1016/j.jbi.2023.104364
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