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Graph Visualization: Alternative Models Inspired by Bioinformatics

Currently, the methods and means of human–machine interaction and visualization as its integral part are being increasingly developed. In various fields of scientific knowledge and technology, there is a need to find and select the most effective visualization models for various types of data, as we...

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Detalles Bibliográficos
Autores principales: Kolomeets, Maxim, Desnitsky, Vasily, Kotenko, Igor, Chechulin, Andrey
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10099065/
https://www.ncbi.nlm.nih.gov/pubmed/37050807
http://dx.doi.org/10.3390/s23073747
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author Kolomeets, Maxim
Desnitsky, Vasily
Kotenko, Igor
Chechulin, Andrey
author_facet Kolomeets, Maxim
Desnitsky, Vasily
Kotenko, Igor
Chechulin, Andrey
author_sort Kolomeets, Maxim
collection PubMed
description Currently, the methods and means of human–machine interaction and visualization as its integral part are being increasingly developed. In various fields of scientific knowledge and technology, there is a need to find and select the most effective visualization models for various types of data, as well as to develop automation tools for the process of choosing the best visualization model for a specific case. There are many data visualization tools in various application fields, but at the same time, the main difficulty lies in presenting data of an interconnected (node-link) structure, i.e., networks. Typically, a lot of software means use graphs as the most straightforward and versatile models. To facilitate visual analysis, researchers are developing ways to arrange graph elements to make comparing, searching, and navigating data easier. However, in addition to graphs, there are many other visualization models that are less versatile but have the potential to expand the capabilities of the analyst and provide alternative solutions. In this work, we collected a variety of visualization models, which we call alternative models, to demonstrate how different concepts of information representation can be realized. We believe that adapting these models to improve the means of human–machine interaction will help analysts make significant progress in solving the problems researchers face when working with graphs.
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spelling pubmed-100990652023-04-14 Graph Visualization: Alternative Models Inspired by Bioinformatics Kolomeets, Maxim Desnitsky, Vasily Kotenko, Igor Chechulin, Andrey Sensors (Basel) Review Currently, the methods and means of human–machine interaction and visualization as its integral part are being increasingly developed. In various fields of scientific knowledge and technology, there is a need to find and select the most effective visualization models for various types of data, as well as to develop automation tools for the process of choosing the best visualization model for a specific case. There are many data visualization tools in various application fields, but at the same time, the main difficulty lies in presenting data of an interconnected (node-link) structure, i.e., networks. Typically, a lot of software means use graphs as the most straightforward and versatile models. To facilitate visual analysis, researchers are developing ways to arrange graph elements to make comparing, searching, and navigating data easier. However, in addition to graphs, there are many other visualization models that are less versatile but have the potential to expand the capabilities of the analyst and provide alternative solutions. In this work, we collected a variety of visualization models, which we call alternative models, to demonstrate how different concepts of information representation can be realized. We believe that adapting these models to improve the means of human–machine interaction will help analysts make significant progress in solving the problems researchers face when working with graphs. MDPI 2023-04-04 /pmc/articles/PMC10099065/ /pubmed/37050807 http://dx.doi.org/10.3390/s23073747 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Kolomeets, Maxim
Desnitsky, Vasily
Kotenko, Igor
Chechulin, Andrey
Graph Visualization: Alternative Models Inspired by Bioinformatics
title Graph Visualization: Alternative Models Inspired by Bioinformatics
title_full Graph Visualization: Alternative Models Inspired by Bioinformatics
title_fullStr Graph Visualization: Alternative Models Inspired by Bioinformatics
title_full_unstemmed Graph Visualization: Alternative Models Inspired by Bioinformatics
title_short Graph Visualization: Alternative Models Inspired by Bioinformatics
title_sort graph visualization: alternative models inspired by bioinformatics
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10099065/
https://www.ncbi.nlm.nih.gov/pubmed/37050807
http://dx.doi.org/10.3390/s23073747
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