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Prebiotic Foam Environments to Oligomerize and Accumulate RNA

When water interacts with porous rocks, its wetting and surface tension properties create air bubbles in large number. To probe their relevance as a setting for the emergence of life, we microfluidically created foams that were stabilized with lipids. A persistent non‐equilibrium setting was provide...

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Autores principales: Tekin, Emre, Salditt, Annalena, Schwintek, Philipp, Wunnava, Sreekar, Langlais, Juliette, Saenz, James, Tang, Dora, Schwille, Petra, Mast, Christof, Braun, Dieter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10100173/
https://www.ncbi.nlm.nih.gov/pubmed/36354762
http://dx.doi.org/10.1002/cbic.202200423
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author Tekin, Emre
Salditt, Annalena
Schwintek, Philipp
Wunnava, Sreekar
Langlais, Juliette
Saenz, James
Tang, Dora
Schwille, Petra
Mast, Christof
Braun, Dieter
author_facet Tekin, Emre
Salditt, Annalena
Schwintek, Philipp
Wunnava, Sreekar
Langlais, Juliette
Saenz, James
Tang, Dora
Schwille, Petra
Mast, Christof
Braun, Dieter
author_sort Tekin, Emre
collection PubMed
description When water interacts with porous rocks, its wetting and surface tension properties create air bubbles in large number. To probe their relevance as a setting for the emergence of life, we microfluidically created foams that were stabilized with lipids. A persistent non‐equilibrium setting was provided by a thermal gradient. The foam's large surface area triggers capillary flows and wet‐dry reactions that accumulate, aggregate and oligomerize RNA, offering a compelling habitat for RNA‐based early life as it offers both wet and dry conditions in direct neighborhood. Lipids were screened to stabilize the foams. The prebiotically more probable myristic acid stabilized foams over many hours. The capillary flow created by the evaporation at the water‐air interface provided an attractive force for molecule localization and selection for molecule size. For example, self‐binding oligonucleotide sequences accumulated and formed micrometer‐sized aggregates which were shuttled between gas bubbles. The wet‐dry cycles at the foam bubble interfaces triggered a non‐enzymatic RNA oligomerization from 2’,3’‐cyclic CMP and GMP which despite the small dry reaction volume was superior to the corresponding dry reaction. The found characteristics make heated foams an interesting, localized setting for early molecular evolution.
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spelling pubmed-101001732023-04-14 Prebiotic Foam Environments to Oligomerize and Accumulate RNA Tekin, Emre Salditt, Annalena Schwintek, Philipp Wunnava, Sreekar Langlais, Juliette Saenz, James Tang, Dora Schwille, Petra Mast, Christof Braun, Dieter Chembiochem Research Articles When water interacts with porous rocks, its wetting and surface tension properties create air bubbles in large number. To probe their relevance as a setting for the emergence of life, we microfluidically created foams that were stabilized with lipids. A persistent non‐equilibrium setting was provided by a thermal gradient. The foam's large surface area triggers capillary flows and wet‐dry reactions that accumulate, aggregate and oligomerize RNA, offering a compelling habitat for RNA‐based early life as it offers both wet and dry conditions in direct neighborhood. Lipids were screened to stabilize the foams. The prebiotically more probable myristic acid stabilized foams over many hours. The capillary flow created by the evaporation at the water‐air interface provided an attractive force for molecule localization and selection for molecule size. For example, self‐binding oligonucleotide sequences accumulated and formed micrometer‐sized aggregates which were shuttled between gas bubbles. The wet‐dry cycles at the foam bubble interfaces triggered a non‐enzymatic RNA oligomerization from 2’,3’‐cyclic CMP and GMP which despite the small dry reaction volume was superior to the corresponding dry reaction. The found characteristics make heated foams an interesting, localized setting for early molecular evolution. John Wiley and Sons Inc. 2022-11-18 2022-12-16 /pmc/articles/PMC10100173/ /pubmed/36354762 http://dx.doi.org/10.1002/cbic.202200423 Text en © 2022 The Authors. ChemBioChem published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Research Articles
Tekin, Emre
Salditt, Annalena
Schwintek, Philipp
Wunnava, Sreekar
Langlais, Juliette
Saenz, James
Tang, Dora
Schwille, Petra
Mast, Christof
Braun, Dieter
Prebiotic Foam Environments to Oligomerize and Accumulate RNA
title Prebiotic Foam Environments to Oligomerize and Accumulate RNA
title_full Prebiotic Foam Environments to Oligomerize and Accumulate RNA
title_fullStr Prebiotic Foam Environments to Oligomerize and Accumulate RNA
title_full_unstemmed Prebiotic Foam Environments to Oligomerize and Accumulate RNA
title_short Prebiotic Foam Environments to Oligomerize and Accumulate RNA
title_sort prebiotic foam environments to oligomerize and accumulate rna
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10100173/
https://www.ncbi.nlm.nih.gov/pubmed/36354762
http://dx.doi.org/10.1002/cbic.202200423
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