Cargando…

A Systems Biology Approach To Disentangle the Direct and Indirect Effects of Global Transcription Factors on Gene Expression in Escherichia coli

Delineating the pleiotropic effects of global transcriptional factors (TFs) is critical for understanding the system-wide regulatory response in a particular environment. Currently, with the availability of genome-wide TF binding and gene expression data for Escherichia coli, several gene targets ca...

Descripción completa

Detalles Bibliográficos
Autores principales:	Iyer, Mahesh S., Pal, Ankita, Venkatesh, K. V.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Microbiology 2023
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10100776/ https://www.ncbi.nlm.nih.gov/pubmed/36749045 http://dx.doi.org/10.1128/spectrum.02101-22

Ejemplares similares

Global Transcriptional Regulators Fine-Tune the Translational and Metabolic Efficiency for Optimal Growth of Escherichia coli
por: Iyer, Mahesh S., et al.
Publicado: (2021)

Global pleiotropic effects in adaptively evolved Escherichia coli lacking CRP reveal molecular mechanisms that define the growth physiology
por: Pal, Ankita, et al.
Publicado: (2022)

Correction to ‘Global pleiotropic effects in adaptively evolved Escherichia coli lacking CRP reveal molecular mechanisms that define the growth physiology’
por: Pal, Ankita, et al.
Publicado: (2022)

Direct and indirect effects of H-NS and Fis on global gene expression control in Escherichia coli
por: Kahramanoglou, Christina, et al.
Publicado: (2011)

Disentangling direct from indirect relationships in association networks
por: Xiao, Naijia, et al.
Publicado: (2022)

Disentangling direct and indirect drivers of farmland biodiversity at landscape scale
por: Meier, Eliane Seraina, et al.
Publicado: (2022)

Disentangling Direct from Indirect Co-Evolution of Residues in Protein Alignments
por: Burger, Lukas, et al.
Publicado: (2010)

Disentangling direct and indirect effects of local temperature on abundance of mountain birds and implications for understanding global change impacts
por: Ceresa, Francesco, et al.
Publicado: (2021)

Disentangling direct and indirect effects of water availability, vegetation, and topography on avian diversity
por: Remeš, Vladimír, et al.
Publicado: (2018)

Disentangling direct and indirect effects of landscape structure on urban bird richness and functional diversity
por: Suárez‐Castro, Andrés Felipe, et al.
Publicado: (2022)

Disentangling direct and indirect determinants of the duration of maternal care in brown bears: Environmental context matters
por: Van de Walle, Joanie, et al.
Publicado: (2020)

Global transcriptional responses to the bacteriocin colicin M in Escherichia coli
por: Kamenšek, Simona, et al.
Publicado: (2013)

Regulation of Global Transcription in Escherichia coli by Rsd and 6S RNA
por: Lal, Avantika, et al.
Publicado: (2018)

Transcriptional effects of CRP* expression in Escherichia coli
por: Khankal, Reza, et al.
Publicado: (2009)

The spatial biology of transcription and translation in rapidly growing Escherichia coli
por: Bakshi, Somenath, et al.
Publicado: (2015)

Disentangling direct and indirect effects of experimental grassland management and plant functional-group manipulation on plant and leafhopper diversity
por: Everwand, Georg, et al.
Publicado: (2014)

Significantly improved solvent tolerance of Escherichia coli by global transcription machinery engineering
por: Zhang, Fa, et al.
Publicado: (2015)

Disentangling Host-Microbiota Regulation of Lipid Secretion by Enterocytes: Insights from Commensals Lactobacillus paracasei and Escherichia coli
por: Tazi, Asmaa, et al.
Publicado: (2018)

Disentangling global and local ring currents
por: Bradley, David, et al.
Publicado: (2023)

Photochemical Synthesis of Silver Hydrosol Stabilized by Carbonate Ions and Study of Its Bactericidal Impact on Escherichia coli: Direct and Indirect Effects
por: Ershov, Vadim, et al.
Publicado: (2022)

Widespread Antisense Transcription in Escherichia coli
por: Dornenburg, James E., et al.
Publicado: (2010)

Biological synthesis of coumarins in Escherichia coli
por: Yang, So-Mi, et al.
Publicado: (2015)

Biological Synthesis of Genistein in Escherichia coli
por: Kim, Bong-Gyu
Publicado: (2020)

Glycosuria Alters Uropathogenic Escherichia coli Global Gene Expression and Virulence
por: Islam, Md Jahirul, et al.
Publicado: (2022)

Transcriptional control of motility enables directional movement of Escherichia coli in a signal gradient
por: Ravichandar, Jayamary Divya, et al.
Publicado: (2017)

Direct and indirect impacts of synthetic biology on biodiversity conservation
por: Macfarlane, Nicholas B.W., et al.
Publicado: (2022)

Disentangling transcription factor binding site complexity
por: Eggeling, Ralf
Publicado: (2018)

Calibrating Transcriptional Activity Using Constitutive Synthetic Promoters in Mutants for Global Regulators in Escherichia coli
por: Sanches-Medeiros, Ananda, et al.
Publicado: (2018)

Secretion of polyhydroxybutyrate in Escherichia coli using a synthetic biological engineering approach
por: Rahman, Asif, et al.
Publicado: (2013)

Ranges of control in the transcriptional regulation of Escherichia coli
por: Sonnenschein, Nikolaus, et al.
Publicado: (2009)

Sensory Systems and Transcriptional Regulation in Escherichia coli
por: Femerling, Georgette, et al.
Publicado: (2022)

Directed evolution of cell size in Escherichia coli
por: Yoshida, Mari, et al.
Publicado: (2014)

Hierarchical Post-transcriptional Regulation of Colicin E2 Expression in Escherichia coli
por: Lechner, Matthias, et al.
Publicado: (2016)

ClbR Is the Key Transcriptional Activator of Colibactin Gene Expression in Escherichia coli
por: Wallenstein, Alexander, et al.
Publicado: (2020)

Optimizing Granulocyte Colony-Stimulating Factor Transcript for Enhanced Expression in Escherichia coli
por: Datta, Sonal
Publicado: (2021)

An embryonic system to assess direct and indirect Wnt transcriptional targets
por: Suresh, Jahnavi, et al.
Publicado: (2017)

Directed evolution for soluble and active periplasmic expression of bovine enterokinase in Escherichia coli
por: Lee, Weiluo, et al.
Publicado: (2022)

Co-expression of RNA–protein complexes in Escherichia coli and applications to RNA biology
por: Ponchon, Luc, et al.
Publicado: (2013)

NrdR Transcription Regulation: Global Proteome Analysis and Its Role in Escherichia coli Viability and Virulence
por: Naveen, Vankadari, et al.
Publicado: (2016)

Effect of an Eco-Friendly Cuminaldehyde Guanylhydrazone Disinfectant on Shiga Toxin Production and Global Transcription of Escherichia coli
por: Wang, Yan, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_dk8th71ahba2r8s29glku7ncq9