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Diagnostic Assessment of Deep Learning Algorithms for Frozen Tissue Section Analysis in Women with Breast Cancer
PURPOSE: Assessing the metastasis status of the sentinel lymph nodes (SLNs) for hematoxylin and eosin–stained frozen tissue sections by pathologists is an essential but tedious and time-consuming task that contributes to accurate breast cancer staging. This study aimed to review a challenge competit...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean Cancer Association
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10101783/ https://www.ncbi.nlm.nih.gov/pubmed/36097806 http://dx.doi.org/10.4143/crt.2022.055 |
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author | Kim, Young-Gon Song, In Hye Cho, Seung Yeon Kim, Sungchul Kim, Milim Ahn, Soomin Lee, Hyunna Yang, Dong Hyun Kim, Namkug Kim, Sungwan Kim, Taewoo Kim, Daeyoung Choi, Jonghyeon Lee, Ki-Sun Ma, Minuk Jo, Minki Park, So Yeon Gong, Gyungyub |
author_facet | Kim, Young-Gon Song, In Hye Cho, Seung Yeon Kim, Sungchul Kim, Milim Ahn, Soomin Lee, Hyunna Yang, Dong Hyun Kim, Namkug Kim, Sungwan Kim, Taewoo Kim, Daeyoung Choi, Jonghyeon Lee, Ki-Sun Ma, Minuk Jo, Minki Park, So Yeon Gong, Gyungyub |
author_sort | Kim, Young-Gon |
collection | PubMed |
description | PURPOSE: Assessing the metastasis status of the sentinel lymph nodes (SLNs) for hematoxylin and eosin–stained frozen tissue sections by pathologists is an essential but tedious and time-consuming task that contributes to accurate breast cancer staging. This study aimed to review a challenge competition (HeLP 2019) for the development of automated solutions for classifying the metastasis status of breast cancer patients. MATERIALS AND METHODS: A total of 524 digital slides were obtained from frozen SLN sections: 297 (56.7%) from Asan Medical Center (AMC) and 227 (43.4%) from Seoul National University Bundang Hospital (SNUBH), South Korea. The slides were divided into training, development, and validation sets, where the development set comprised slides from both institutions and training and validation set included slides from only AMC and SNUBH, respectively. The algorithms were assessed for area under the receiver operating characteristic curve (AUC) and measurement of the longest metastatic tumor diameter. The final total scores were calculated as the mean of the two metrics, and the three teams with AUC values greater than 0.500 were selected for review and analysis in this study. RESULTS: The top three teams showed AUC values of 0.891, 0.809, and 0.736 and major axis prediction scores of 0.525, 0.459, and 0.387 for the validation set. The major factor that lowered the diagnostic accuracy was micro-metastasis. CONCLUSION: In this challenge competition, accurate deep learning algorithms were developed that can be helpful for making a diagnosis on intraoperative SLN biopsy. The clinical utility of this approach was evaluated by including an external validation set from SNUBH. |
format | Online Article Text |
id | pubmed-10101783 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Korean Cancer Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-101017832023-04-15 Diagnostic Assessment of Deep Learning Algorithms for Frozen Tissue Section Analysis in Women with Breast Cancer Kim, Young-Gon Song, In Hye Cho, Seung Yeon Kim, Sungchul Kim, Milim Ahn, Soomin Lee, Hyunna Yang, Dong Hyun Kim, Namkug Kim, Sungwan Kim, Taewoo Kim, Daeyoung Choi, Jonghyeon Lee, Ki-Sun Ma, Minuk Jo, Minki Park, So Yeon Gong, Gyungyub Cancer Res Treat Original Article PURPOSE: Assessing the metastasis status of the sentinel lymph nodes (SLNs) for hematoxylin and eosin–stained frozen tissue sections by pathologists is an essential but tedious and time-consuming task that contributes to accurate breast cancer staging. This study aimed to review a challenge competition (HeLP 2019) for the development of automated solutions for classifying the metastasis status of breast cancer patients. MATERIALS AND METHODS: A total of 524 digital slides were obtained from frozen SLN sections: 297 (56.7%) from Asan Medical Center (AMC) and 227 (43.4%) from Seoul National University Bundang Hospital (SNUBH), South Korea. The slides were divided into training, development, and validation sets, where the development set comprised slides from both institutions and training and validation set included slides from only AMC and SNUBH, respectively. The algorithms were assessed for area under the receiver operating characteristic curve (AUC) and measurement of the longest metastatic tumor diameter. The final total scores were calculated as the mean of the two metrics, and the three teams with AUC values greater than 0.500 were selected for review and analysis in this study. RESULTS: The top three teams showed AUC values of 0.891, 0.809, and 0.736 and major axis prediction scores of 0.525, 0.459, and 0.387 for the validation set. The major factor that lowered the diagnostic accuracy was micro-metastasis. CONCLUSION: In this challenge competition, accurate deep learning algorithms were developed that can be helpful for making a diagnosis on intraoperative SLN biopsy. The clinical utility of this approach was evaluated by including an external validation set from SNUBH. Korean Cancer Association 2023-04 2022-09-06 /pmc/articles/PMC10101783/ /pubmed/36097806 http://dx.doi.org/10.4143/crt.2022.055 Text en Copyright © 2023 by the Korean Cancer Association https://creativecommons.org/licenses/by-nc/4.0/This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Kim, Young-Gon Song, In Hye Cho, Seung Yeon Kim, Sungchul Kim, Milim Ahn, Soomin Lee, Hyunna Yang, Dong Hyun Kim, Namkug Kim, Sungwan Kim, Taewoo Kim, Daeyoung Choi, Jonghyeon Lee, Ki-Sun Ma, Minuk Jo, Minki Park, So Yeon Gong, Gyungyub Diagnostic Assessment of Deep Learning Algorithms for Frozen Tissue Section Analysis in Women with Breast Cancer |
title | Diagnostic Assessment of Deep Learning Algorithms for Frozen Tissue Section Analysis in Women with Breast Cancer |
title_full | Diagnostic Assessment of Deep Learning Algorithms for Frozen Tissue Section Analysis in Women with Breast Cancer |
title_fullStr | Diagnostic Assessment of Deep Learning Algorithms for Frozen Tissue Section Analysis in Women with Breast Cancer |
title_full_unstemmed | Diagnostic Assessment of Deep Learning Algorithms for Frozen Tissue Section Analysis in Women with Breast Cancer |
title_short | Diagnostic Assessment of Deep Learning Algorithms for Frozen Tissue Section Analysis in Women with Breast Cancer |
title_sort | diagnostic assessment of deep learning algorithms for frozen tissue section analysis in women with breast cancer |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10101783/ https://www.ncbi.nlm.nih.gov/pubmed/36097806 http://dx.doi.org/10.4143/crt.2022.055 |
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