Cargando…
Improved detection of aberrant splicing using the Intron Jaccard Index
Detection of aberrantly spliced genes is an important step in RNA-seq-based rare disease diagnostics. We recently developed FRASER, a denoising autoencoder-based method for aberrant splicing detection that outperformed alternative approaches. However, as FRASER’s three splice metrics are partially r...
Autores principales: | Scheller, Ines F., Lutz, Karoline, Mertes, Christian, Yépez, Vicente A., Gagneur, Julien |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10104204/ https://www.ncbi.nlm.nih.gov/pubmed/37066374 http://dx.doi.org/10.1101/2023.03.31.23287997 |
Ejemplares similares
-
Detection of aberrant splicing events in RNA-seq data using FRASER
por: Mertes, Christian, et al.
Publicado: (2021) -
Author Correction: Detection of aberrant splicing events in RNA-seq data using FRASER
por: Mertes, Christian, et al.
Publicado: (2022) -
Integrating Triangle and Jaccard similarities for recommendation
por: Sun, Shuang-Bo, et al.
Publicado: (2017) -
The minimizer Jaccard estimator is biased and inconsistent
por: Belbasi, Mahdi, et al.
Publicado: (2022) -
An Alu-derived intronic splicing enhancer facilitates intronic processing and modulates aberrant splicing in ATM
por: Pastor, Tibor, et al.
Publicado: (2009)