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Circular RNA expression alterations and function prediction in OSA-induced pancreatic injury in mice: New insights into pathogenesis

OBJECTIVES: Increasing studies have shown that circular RNAs (circRNAs) participate in the pathogenesis and progression of many diseases. However, the function of circRNAs in obstructive sleep apnea (OSA)-induced pancreatic damage has not been fully elucidated. In this study, the altered circRNA pro...

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Autores principales: Chen, Qingshi, Lin, Jiayu, Chen, Zhiyu, Che, Lishuang, Liu, Dexin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10104327/
https://www.ncbi.nlm.nih.gov/pubmed/37058537
http://dx.doi.org/10.1371/journal.pone.0284459
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author Chen, Qingshi
Lin, Jiayu
Chen, Zhiyu
Che, Lishuang
Liu, Dexin
author_facet Chen, Qingshi
Lin, Jiayu
Chen, Zhiyu
Che, Lishuang
Liu, Dexin
author_sort Chen, Qingshi
collection PubMed
description OBJECTIVES: Increasing studies have shown that circular RNAs (circRNAs) participate in the pathogenesis and progression of many diseases. However, the function of circRNAs in obstructive sleep apnea (OSA)-induced pancreatic damage has not been fully elucidated. In this study, the altered circRNA profiles in a chronic intermittent hypoxia (CIH) mouse model were investigated, aiming to provide novel clues for delineating the underlying mechanisms of OSA-induced pancreatic injury. METHODS: A CIH mouse model was established. circRNA microarray was then applied to profile circRNA expression in pancreatic samples from CIH groups and controls. Our preliminary findings were validated by qRT-PCR. Subsequently, GO and KEGG pathway analyses were carried out to annotate the biological functions of target genes of circRNAs. Lastly, we constructed a circRNA-miRNA-mRNA (ceRNA) network according to the predicted circRNA–miRNA and miRNA–mRNA pairs. RESULTS: A total of 26 circRNAs were identified to be differentially expressed, with 5 downregulated and 21 upregulated in the CIH model mice. Six selected circRNAs were preliminarily used to confirm the results by qRT-PCR, which were consistent with microarray. GO and pathway analysis indicated that numerous mRNAs were involved in the MAPK signaling pathway. The ceRNA analysis displayed the broad potentials of the dysregulated circRNAs to modulate their target genes by acting as miRNAs sponges. CONCLUSIONS: Taken together, our study first revealed the specific expression profile of circRNAs in CIH-induced pancreatic injury, which suggested a novel focus for investigating the molecular mechanism of OSA-induced pancreatic damage through modulating circRNAs.
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spelling pubmed-101043272023-04-15 Circular RNA expression alterations and function prediction in OSA-induced pancreatic injury in mice: New insights into pathogenesis Chen, Qingshi Lin, Jiayu Chen, Zhiyu Che, Lishuang Liu, Dexin PLoS One Research Article OBJECTIVES: Increasing studies have shown that circular RNAs (circRNAs) participate in the pathogenesis and progression of many diseases. However, the function of circRNAs in obstructive sleep apnea (OSA)-induced pancreatic damage has not been fully elucidated. In this study, the altered circRNA profiles in a chronic intermittent hypoxia (CIH) mouse model were investigated, aiming to provide novel clues for delineating the underlying mechanisms of OSA-induced pancreatic injury. METHODS: A CIH mouse model was established. circRNA microarray was then applied to profile circRNA expression in pancreatic samples from CIH groups and controls. Our preliminary findings were validated by qRT-PCR. Subsequently, GO and KEGG pathway analyses were carried out to annotate the biological functions of target genes of circRNAs. Lastly, we constructed a circRNA-miRNA-mRNA (ceRNA) network according to the predicted circRNA–miRNA and miRNA–mRNA pairs. RESULTS: A total of 26 circRNAs were identified to be differentially expressed, with 5 downregulated and 21 upregulated in the CIH model mice. Six selected circRNAs were preliminarily used to confirm the results by qRT-PCR, which were consistent with microarray. GO and pathway analysis indicated that numerous mRNAs were involved in the MAPK signaling pathway. The ceRNA analysis displayed the broad potentials of the dysregulated circRNAs to modulate their target genes by acting as miRNAs sponges. CONCLUSIONS: Taken together, our study first revealed the specific expression profile of circRNAs in CIH-induced pancreatic injury, which suggested a novel focus for investigating the molecular mechanism of OSA-induced pancreatic damage through modulating circRNAs. Public Library of Science 2023-04-14 /pmc/articles/PMC10104327/ /pubmed/37058537 http://dx.doi.org/10.1371/journal.pone.0284459 Text en © 2023 Chen et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Chen, Qingshi
Lin, Jiayu
Chen, Zhiyu
Che, Lishuang
Liu, Dexin
Circular RNA expression alterations and function prediction in OSA-induced pancreatic injury in mice: New insights into pathogenesis
title Circular RNA expression alterations and function prediction in OSA-induced pancreatic injury in mice: New insights into pathogenesis
title_full Circular RNA expression alterations and function prediction in OSA-induced pancreatic injury in mice: New insights into pathogenesis
title_fullStr Circular RNA expression alterations and function prediction in OSA-induced pancreatic injury in mice: New insights into pathogenesis
title_full_unstemmed Circular RNA expression alterations and function prediction in OSA-induced pancreatic injury in mice: New insights into pathogenesis
title_short Circular RNA expression alterations and function prediction in OSA-induced pancreatic injury in mice: New insights into pathogenesis
title_sort circular rna expression alterations and function prediction in osa-induced pancreatic injury in mice: new insights into pathogenesis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10104327/
https://www.ncbi.nlm.nih.gov/pubmed/37058537
http://dx.doi.org/10.1371/journal.pone.0284459
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