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Size distributions of intracellular condensates reflect competition between coalescence and nucleation

Phase separation of biomolecules into condensates has emerged as a mechanism for intracellular organization and affects many intracellular processes, including reaction pathways through the clustering of enzymes and pathway intermediates. Precise and rapid spatiotemporal control of reactions by cond...

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Autores principales: Lee, Daniel S. W., Choi, Chang-Hyun, Sanders, David W., Beckers, Lien, Riback, Joshua A., Brangwynne, Clifford P., Wingreen, Ned S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10104779/
https://www.ncbi.nlm.nih.gov/pubmed/37073403
http://dx.doi.org/10.1038/s41567-022-01917-0
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author Lee, Daniel S. W.
Choi, Chang-Hyun
Sanders, David W.
Beckers, Lien
Riback, Joshua A.
Brangwynne, Clifford P.
Wingreen, Ned S.
author_facet Lee, Daniel S. W.
Choi, Chang-Hyun
Sanders, David W.
Beckers, Lien
Riback, Joshua A.
Brangwynne, Clifford P.
Wingreen, Ned S.
author_sort Lee, Daniel S. W.
collection PubMed
description Phase separation of biomolecules into condensates has emerged as a mechanism for intracellular organization and affects many intracellular processes, including reaction pathways through the clustering of enzymes and pathway intermediates. Precise and rapid spatiotemporal control of reactions by condensates requires tuning of their sizes. However, the physical processes that govern the distribution of condensate sizes remain unclear. Here we show that both native and synthetic condensates display an exponential size distribution, which is captured by Monte Carlo simulations of fast nucleation followed by coalescence. In contrast, pathological aggregates exhibit a power-law size distribution. These distinct behaviours reflect the relative importance of nucleation and coalescence kinetics. We demonstrate this by utilizing a combination of synthetic and native condensates to probe the underlying physical mechanisms determining condensate size. The appearance of exponential distributions for abrupt nucleation versus power-law distributions under continuous nucleation may reflect a general principle that determines condensate size distributions.
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spelling pubmed-101047792023-04-16 Size distributions of intracellular condensates reflect competition between coalescence and nucleation Lee, Daniel S. W. Choi, Chang-Hyun Sanders, David W. Beckers, Lien Riback, Joshua A. Brangwynne, Clifford P. Wingreen, Ned S. Nat Phys Article Phase separation of biomolecules into condensates has emerged as a mechanism for intracellular organization and affects many intracellular processes, including reaction pathways through the clustering of enzymes and pathway intermediates. Precise and rapid spatiotemporal control of reactions by condensates requires tuning of their sizes. However, the physical processes that govern the distribution of condensate sizes remain unclear. Here we show that both native and synthetic condensates display an exponential size distribution, which is captured by Monte Carlo simulations of fast nucleation followed by coalescence. In contrast, pathological aggregates exhibit a power-law size distribution. These distinct behaviours reflect the relative importance of nucleation and coalescence kinetics. We demonstrate this by utilizing a combination of synthetic and native condensates to probe the underlying physical mechanisms determining condensate size. The appearance of exponential distributions for abrupt nucleation versus power-law distributions under continuous nucleation may reflect a general principle that determines condensate size distributions. Nature Publishing Group UK 2023-02-02 2023 /pmc/articles/PMC10104779/ /pubmed/37073403 http://dx.doi.org/10.1038/s41567-022-01917-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Lee, Daniel S. W.
Choi, Chang-Hyun
Sanders, David W.
Beckers, Lien
Riback, Joshua A.
Brangwynne, Clifford P.
Wingreen, Ned S.
Size distributions of intracellular condensates reflect competition between coalescence and nucleation
title Size distributions of intracellular condensates reflect competition between coalescence and nucleation
title_full Size distributions of intracellular condensates reflect competition between coalescence and nucleation
title_fullStr Size distributions of intracellular condensates reflect competition between coalescence and nucleation
title_full_unstemmed Size distributions of intracellular condensates reflect competition between coalescence and nucleation
title_short Size distributions of intracellular condensates reflect competition between coalescence and nucleation
title_sort size distributions of intracellular condensates reflect competition between coalescence and nucleation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10104779/
https://www.ncbi.nlm.nih.gov/pubmed/37073403
http://dx.doi.org/10.1038/s41567-022-01917-0
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