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RIDA®GENE Helicobacter pylori PCR on the ELITe InGenius System

PCR detection of Helicobacter pylori infection in gastric biopsies allows the detection of this bacterium and the mutations associated with macrolide resistance. The aim of this study was to evaluate the performance of RIDA®GENE H. pylori PCR (r-Biopharm) on the ELITe InGenius System (Elitech). Two...

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Autores principales: Bénéjat, Lucie, Ducournau, Astrid, Martins, Chloé Domingues, Bessède, Emilie, Lehours, Philippe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10105649/
https://www.ncbi.nlm.nih.gov/pubmed/36929324
http://dx.doi.org/10.1007/s10096-023-04563-3
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author Bénéjat, Lucie
Ducournau, Astrid
Martins, Chloé Domingues
Bessède, Emilie
Lehours, Philippe
author_facet Bénéjat, Lucie
Ducournau, Astrid
Martins, Chloé Domingues
Bessède, Emilie
Lehours, Philippe
author_sort Bénéjat, Lucie
collection PubMed
description PCR detection of Helicobacter pylori infection in gastric biopsies allows the detection of this bacterium and the mutations associated with macrolide resistance. The aim of this study was to evaluate the performance of RIDA®GENE H. pylori PCR (r-Biopharm) on the ELITe InGenius System (Elitech). Two hundred gastric biopsies were obtained. These biopsies were ground in nutrient broth. Two hundred microliters of this suspension was treated with proteinase K, and then, 200 µL was transferred to an ELITe InGenius sample tube and tested using RIDA®GENE H. pylori PCR reagents. In-house H. pylori PCR was used as a reference. The sensitivity of RIDA®GENE H. pylori PCR with ELITe InGenius was 100%, the specificity was 98% (95% confidence interval (CI), 95.3–100%), the PPV was 98% (95% CI, 95.3–100%), and the NPV was 100% for the detection of H. pylori. All of these parameters were 100% for the categorization of macrolide resistance. The adaptation of RIDA®GENE H. pylori PCR reagents on the ELITe InGenius System was successful. This PCR is easy to use on this system. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10096-023-04563-3.
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spelling pubmed-101056492023-04-17 RIDA®GENE Helicobacter pylori PCR on the ELITe InGenius System Bénéjat, Lucie Ducournau, Astrid Martins, Chloé Domingues Bessède, Emilie Lehours, Philippe Eur J Clin Microbiol Infect Dis Original Article PCR detection of Helicobacter pylori infection in gastric biopsies allows the detection of this bacterium and the mutations associated with macrolide resistance. The aim of this study was to evaluate the performance of RIDA®GENE H. pylori PCR (r-Biopharm) on the ELITe InGenius System (Elitech). Two hundred gastric biopsies were obtained. These biopsies were ground in nutrient broth. Two hundred microliters of this suspension was treated with proteinase K, and then, 200 µL was transferred to an ELITe InGenius sample tube and tested using RIDA®GENE H. pylori PCR reagents. In-house H. pylori PCR was used as a reference. The sensitivity of RIDA®GENE H. pylori PCR with ELITe InGenius was 100%, the specificity was 98% (95% confidence interval (CI), 95.3–100%), the PPV was 98% (95% CI, 95.3–100%), and the NPV was 100% for the detection of H. pylori. All of these parameters were 100% for the categorization of macrolide resistance. The adaptation of RIDA®GENE H. pylori PCR reagents on the ELITe InGenius System was successful. This PCR is easy to use on this system. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10096-023-04563-3. Springer Berlin Heidelberg 2023-03-16 2023 /pmc/articles/PMC10105649/ /pubmed/36929324 http://dx.doi.org/10.1007/s10096-023-04563-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Bénéjat, Lucie
Ducournau, Astrid
Martins, Chloé Domingues
Bessède, Emilie
Lehours, Philippe
RIDA®GENE Helicobacter pylori PCR on the ELITe InGenius System
title RIDA®GENE Helicobacter pylori PCR on the ELITe InGenius System
title_full RIDA®GENE Helicobacter pylori PCR on the ELITe InGenius System
title_fullStr RIDA®GENE Helicobacter pylori PCR on the ELITe InGenius System
title_full_unstemmed RIDA®GENE Helicobacter pylori PCR on the ELITe InGenius System
title_short RIDA®GENE Helicobacter pylori PCR on the ELITe InGenius System
title_sort rida®gene helicobacter pylori pcr on the elite ingenius system
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10105649/
https://www.ncbi.nlm.nih.gov/pubmed/36929324
http://dx.doi.org/10.1007/s10096-023-04563-3
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