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Predicting a kidney transplant patient’s pre-transplant functional status based on information from waitlist registration
With over 100,000 patients on the kidney transplant waitlist in 2019, it is important to understand if and how the functional status of a patient may change while on the waitlist. Recorded both at registration and just prior to transplantation, the Karnofsky Performance Score measures a patient’s fu...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10105757/ https://www.ncbi.nlm.nih.gov/pubmed/37061525 http://dx.doi.org/10.1038/s41598-023-33117-y |
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author | Mark, Ethan Goldsman, David Gurbaxani, Brian Keskinocak, Pinar Sokol, Joel |
author_facet | Mark, Ethan Goldsman, David Gurbaxani, Brian Keskinocak, Pinar Sokol, Joel |
author_sort | Mark, Ethan |
collection | PubMed |
description | With over 100,000 patients on the kidney transplant waitlist in 2019, it is important to understand if and how the functional status of a patient may change while on the waitlist. Recorded both at registration and just prior to transplantation, the Karnofsky Performance Score measures a patient’s functional status and takes on values ranging from 0 to 100 in increments of 10. Using machine learning techniques, we built a gradient boosting regression model to predict a patient’s pre-transplant functional status based on information known at the time of waitlist registration. The model’s predictions result in an average root mean squared error of 12.99 based on 5 rolling origin cross validations and 12.94 in a separate out-of-time test. In comparison, predicting that the pre-transplant functional status remains the same as the status at registration, results in average root mean squared errors of 14.50 and 14.11 respectively. The analysis is based on 118,401 transplant records from 2007 to 2019. To the best of our knowledge, there has been no previously published research on building a model to predict kidney pre-transplant functional status. We also find that functional status at registration and total serum albumin, have the most impact in predicting the pre-transplant functional status. |
format | Online Article Text |
id | pubmed-10105757 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-101057572023-04-17 Predicting a kidney transplant patient’s pre-transplant functional status based on information from waitlist registration Mark, Ethan Goldsman, David Gurbaxani, Brian Keskinocak, Pinar Sokol, Joel Sci Rep Article With over 100,000 patients on the kidney transplant waitlist in 2019, it is important to understand if and how the functional status of a patient may change while on the waitlist. Recorded both at registration and just prior to transplantation, the Karnofsky Performance Score measures a patient’s functional status and takes on values ranging from 0 to 100 in increments of 10. Using machine learning techniques, we built a gradient boosting regression model to predict a patient’s pre-transplant functional status based on information known at the time of waitlist registration. The model’s predictions result in an average root mean squared error of 12.99 based on 5 rolling origin cross validations and 12.94 in a separate out-of-time test. In comparison, predicting that the pre-transplant functional status remains the same as the status at registration, results in average root mean squared errors of 14.50 and 14.11 respectively. The analysis is based on 118,401 transplant records from 2007 to 2019. To the best of our knowledge, there has been no previously published research on building a model to predict kidney pre-transplant functional status. We also find that functional status at registration and total serum albumin, have the most impact in predicting the pre-transplant functional status. Nature Publishing Group UK 2023-04-15 /pmc/articles/PMC10105757/ /pubmed/37061525 http://dx.doi.org/10.1038/s41598-023-33117-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Mark, Ethan Goldsman, David Gurbaxani, Brian Keskinocak, Pinar Sokol, Joel Predicting a kidney transplant patient’s pre-transplant functional status based on information from waitlist registration |
title | Predicting a kidney transplant patient’s pre-transplant functional status based on information from waitlist registration |
title_full | Predicting a kidney transplant patient’s pre-transplant functional status based on information from waitlist registration |
title_fullStr | Predicting a kidney transplant patient’s pre-transplant functional status based on information from waitlist registration |
title_full_unstemmed | Predicting a kidney transplant patient’s pre-transplant functional status based on information from waitlist registration |
title_short | Predicting a kidney transplant patient’s pre-transplant functional status based on information from waitlist registration |
title_sort | predicting a kidney transplant patient’s pre-transplant functional status based on information from waitlist registration |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10105757/ https://www.ncbi.nlm.nih.gov/pubmed/37061525 http://dx.doi.org/10.1038/s41598-023-33117-y |
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