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Longitudinal lung cancer prediction convolutional neural network model improves the classification of indeterminate pulmonary nodules

A deep learning model (LCP CNN) for the stratification of indeterminate pulmonary nodules (IPNs) demonstrated better discrimination than commonly used clinical prediction models. However, the LCP CNN score is based on a single timepoint that ignores longitudinal information when prior imaging studie...

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Autores principales: Paez, Rafael, Kammer, Michael N., Balar, Aneri, Lakhani, Dhairya A., Knight, Michael, Rowe, Dianna, Xiao, David, Heideman, Brent E., Antic, Sanja L., Chen, Heidi, Chen, Sheau-Chiann, Peikert, Tobias, Sandler, Kim L., Landman, Bennett A., Deppen, Stephen A., Grogan, Eric L., Maldonado, Fabien
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10105767/
https://www.ncbi.nlm.nih.gov/pubmed/37061539
http://dx.doi.org/10.1038/s41598-023-33098-y
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author Paez, Rafael
Kammer, Michael N.
Balar, Aneri
Lakhani, Dhairya A.
Knight, Michael
Rowe, Dianna
Xiao, David
Heideman, Brent E.
Antic, Sanja L.
Chen, Heidi
Chen, Sheau-Chiann
Peikert, Tobias
Sandler, Kim L.
Landman, Bennett A.
Deppen, Stephen A.
Grogan, Eric L.
Maldonado, Fabien
author_facet Paez, Rafael
Kammer, Michael N.
Balar, Aneri
Lakhani, Dhairya A.
Knight, Michael
Rowe, Dianna
Xiao, David
Heideman, Brent E.
Antic, Sanja L.
Chen, Heidi
Chen, Sheau-Chiann
Peikert, Tobias
Sandler, Kim L.
Landman, Bennett A.
Deppen, Stephen A.
Grogan, Eric L.
Maldonado, Fabien
author_sort Paez, Rafael
collection PubMed
description A deep learning model (LCP CNN) for the stratification of indeterminate pulmonary nodules (IPNs) demonstrated better discrimination than commonly used clinical prediction models. However, the LCP CNN score is based on a single timepoint that ignores longitudinal information when prior imaging studies are available. Clinically, IPNs are often followed over time and temporal trends in nodule size or morphology inform management. In this study we investigated whether the change in LCP CNN scores over time was different between benign and malignant nodules. This study used a prospective-specimen collection, retrospective-blinded-evaluation (PRoBE) design. Subjects with incidentally or screening detected IPNs 6–30 mm in diameter with at least 3 consecutive CT scans prior to diagnosis (slice thickness ≤ 1.5 mm) with the same nodule present were included. Disease outcome was adjudicated by biopsy-proven malignancy, biopsy-proven benign disease and absence of growth on at least 2-year imaging follow-up. Lung nodules were analyzed using the Optellum LCP CNN model. Investigators performing image analysis were blinded to all clinical data. The LCP CNN score was determined for 48 benign and 32 malignant nodules. There was no significant difference in the initial LCP CNN score between benign and malignant nodules. Overall, the LCP CNN scores of benign nodules remained relatively stable over time while that of malignant nodules continued to increase over time. The difference in these two trends was statistically significant. We also developed a joint model that incorporates longitudinal LCP CNN scores to predict future probability of cancer. Malignant and benign nodules appear to have distinctive trends in LCP CNN score over time. This suggests that longitudinal modeling may improve radiomic prediction of lung cancer over current models. Additional studies are needed to validate these early findings.
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spelling pubmed-101057672023-04-17 Longitudinal lung cancer prediction convolutional neural network model improves the classification of indeterminate pulmonary nodules Paez, Rafael Kammer, Michael N. Balar, Aneri Lakhani, Dhairya A. Knight, Michael Rowe, Dianna Xiao, David Heideman, Brent E. Antic, Sanja L. Chen, Heidi Chen, Sheau-Chiann Peikert, Tobias Sandler, Kim L. Landman, Bennett A. Deppen, Stephen A. Grogan, Eric L. Maldonado, Fabien Sci Rep Article A deep learning model (LCP CNN) for the stratification of indeterminate pulmonary nodules (IPNs) demonstrated better discrimination than commonly used clinical prediction models. However, the LCP CNN score is based on a single timepoint that ignores longitudinal information when prior imaging studies are available. Clinically, IPNs are often followed over time and temporal trends in nodule size or morphology inform management. In this study we investigated whether the change in LCP CNN scores over time was different between benign and malignant nodules. This study used a prospective-specimen collection, retrospective-blinded-evaluation (PRoBE) design. Subjects with incidentally or screening detected IPNs 6–30 mm in diameter with at least 3 consecutive CT scans prior to diagnosis (slice thickness ≤ 1.5 mm) with the same nodule present were included. Disease outcome was adjudicated by biopsy-proven malignancy, biopsy-proven benign disease and absence of growth on at least 2-year imaging follow-up. Lung nodules were analyzed using the Optellum LCP CNN model. Investigators performing image analysis were blinded to all clinical data. The LCP CNN score was determined for 48 benign and 32 malignant nodules. There was no significant difference in the initial LCP CNN score between benign and malignant nodules. Overall, the LCP CNN scores of benign nodules remained relatively stable over time while that of malignant nodules continued to increase over time. The difference in these two trends was statistically significant. We also developed a joint model that incorporates longitudinal LCP CNN scores to predict future probability of cancer. Malignant and benign nodules appear to have distinctive trends in LCP CNN score over time. This suggests that longitudinal modeling may improve radiomic prediction of lung cancer over current models. Additional studies are needed to validate these early findings. Nature Publishing Group UK 2023-04-15 /pmc/articles/PMC10105767/ /pubmed/37061539 http://dx.doi.org/10.1038/s41598-023-33098-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Paez, Rafael
Kammer, Michael N.
Balar, Aneri
Lakhani, Dhairya A.
Knight, Michael
Rowe, Dianna
Xiao, David
Heideman, Brent E.
Antic, Sanja L.
Chen, Heidi
Chen, Sheau-Chiann
Peikert, Tobias
Sandler, Kim L.
Landman, Bennett A.
Deppen, Stephen A.
Grogan, Eric L.
Maldonado, Fabien
Longitudinal lung cancer prediction convolutional neural network model improves the classification of indeterminate pulmonary nodules
title Longitudinal lung cancer prediction convolutional neural network model improves the classification of indeterminate pulmonary nodules
title_full Longitudinal lung cancer prediction convolutional neural network model improves the classification of indeterminate pulmonary nodules
title_fullStr Longitudinal lung cancer prediction convolutional neural network model improves the classification of indeterminate pulmonary nodules
title_full_unstemmed Longitudinal lung cancer prediction convolutional neural network model improves the classification of indeterminate pulmonary nodules
title_short Longitudinal lung cancer prediction convolutional neural network model improves the classification of indeterminate pulmonary nodules
title_sort longitudinal lung cancer prediction convolutional neural network model improves the classification of indeterminate pulmonary nodules
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10105767/
https://www.ncbi.nlm.nih.gov/pubmed/37061539
http://dx.doi.org/10.1038/s41598-023-33098-y
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