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GL-Segnet: Global-Local representation learning net for medical image segmentation

Medical image segmentation has long been a compelling and fundamental problem in the realm of neuroscience. This is an extremely challenging task due to the intensely interfering irrelevant background information to segment the target. State-of-the-art methods fail to consider simultaneously address...

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Autores principales: Gai, Di, Zhang, Jiqian, Xiao, Yusong, Min, Weidong, Chen, Hui, Wang, Qi, Su, Pengxiang, Huang, Zheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10106565/
https://www.ncbi.nlm.nih.gov/pubmed/37077320
http://dx.doi.org/10.3389/fnins.2023.1153356
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author Gai, Di
Zhang, Jiqian
Xiao, Yusong
Min, Weidong
Chen, Hui
Wang, Qi
Su, Pengxiang
Huang, Zheng
author_facet Gai, Di
Zhang, Jiqian
Xiao, Yusong
Min, Weidong
Chen, Hui
Wang, Qi
Su, Pengxiang
Huang, Zheng
author_sort Gai, Di
collection PubMed
description Medical image segmentation has long been a compelling and fundamental problem in the realm of neuroscience. This is an extremely challenging task due to the intensely interfering irrelevant background information to segment the target. State-of-the-art methods fail to consider simultaneously addressing both long-range and short-range dependencies, and commonly emphasize the semantic information characterization capability while ignoring the geometric detail information implied in the shallow feature maps resulting in the dropping of crucial features. To tackle the above problem, we propose a Global-Local representation learning net for medical image segmentation, namely GL-Segnet. In the Feature encoder, we utilize the Multi-Scale Convolution (MSC) and Multi-Scale Pooling (MSP) modules to encode the global semantic representation information at the shallow level of the network, and multi-scale feature fusion operations are applied to enrich local geometric detail information in a cross-level manner. Beyond that, we adopt a global semantic feature extraction module to perform filtering of irrelevant background information. In Attention-enhancing Decoder, we use the Attention-based feature decoding module to refine the multi-scale fused feature information, which provides effective cues for attention decoding. We exploit the structural similarity between images and the edge gradient information to propose a hybrid loss to improve the segmentation accuracy of the model. Extensive experiments on medical image segmentation from Glas, ISIC, Brain Tumors and SIIM-ACR demonstrated that our GL-Segnet is superior to existing state-of-art methods in subjective visual performance and objective evaluation.
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spelling pubmed-101065652023-04-18 GL-Segnet: Global-Local representation learning net for medical image segmentation Gai, Di Zhang, Jiqian Xiao, Yusong Min, Weidong Chen, Hui Wang, Qi Su, Pengxiang Huang, Zheng Front Neurosci Neuroscience Medical image segmentation has long been a compelling and fundamental problem in the realm of neuroscience. This is an extremely challenging task due to the intensely interfering irrelevant background information to segment the target. State-of-the-art methods fail to consider simultaneously addressing both long-range and short-range dependencies, and commonly emphasize the semantic information characterization capability while ignoring the geometric detail information implied in the shallow feature maps resulting in the dropping of crucial features. To tackle the above problem, we propose a Global-Local representation learning net for medical image segmentation, namely GL-Segnet. In the Feature encoder, we utilize the Multi-Scale Convolution (MSC) and Multi-Scale Pooling (MSP) modules to encode the global semantic representation information at the shallow level of the network, and multi-scale feature fusion operations are applied to enrich local geometric detail information in a cross-level manner. Beyond that, we adopt a global semantic feature extraction module to perform filtering of irrelevant background information. In Attention-enhancing Decoder, we use the Attention-based feature decoding module to refine the multi-scale fused feature information, which provides effective cues for attention decoding. We exploit the structural similarity between images and the edge gradient information to propose a hybrid loss to improve the segmentation accuracy of the model. Extensive experiments on medical image segmentation from Glas, ISIC, Brain Tumors and SIIM-ACR demonstrated that our GL-Segnet is superior to existing state-of-art methods in subjective visual performance and objective evaluation. Frontiers Media S.A. 2023-04-03 /pmc/articles/PMC10106565/ /pubmed/37077320 http://dx.doi.org/10.3389/fnins.2023.1153356 Text en Copyright © 2023 Gai, Zhang, Xiao, Min, Chen, Wang, Su and Huang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Gai, Di
Zhang, Jiqian
Xiao, Yusong
Min, Weidong
Chen, Hui
Wang, Qi
Su, Pengxiang
Huang, Zheng
GL-Segnet: Global-Local representation learning net for medical image segmentation
title GL-Segnet: Global-Local representation learning net for medical image segmentation
title_full GL-Segnet: Global-Local representation learning net for medical image segmentation
title_fullStr GL-Segnet: Global-Local representation learning net for medical image segmentation
title_full_unstemmed GL-Segnet: Global-Local representation learning net for medical image segmentation
title_short GL-Segnet: Global-Local representation learning net for medical image segmentation
title_sort gl-segnet: global-local representation learning net for medical image segmentation
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10106565/
https://www.ncbi.nlm.nih.gov/pubmed/37077320
http://dx.doi.org/10.3389/fnins.2023.1153356
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