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Machine learning for the prediction of all-cause mortality in patients with sepsis-associated acute kidney injury during hospitalization
BACKGROUND: Sepsis-associated acute kidney injury (S-AKI) is considered to be associated with high morbidity and mortality, a commonly accepted model to predict mortality is urged consequently. This study used a machine learning model to identify vital variables associated with mortality in S-AKI pa...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10106833/ https://www.ncbi.nlm.nih.gov/pubmed/37077912 http://dx.doi.org/10.3389/fimmu.2023.1140755 |
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author | Zhou, Hongshan Liu, Leping Zhao, Qinyu Jin, Xin Peng, Zhangzhe Wang, Wei Huang, Ling Xie, Yanyun Xu, Hui Tao, Lijian Xiao, Xiangcheng Nie, Wannian Liu, Fang Li, Li Yuan, Qiongjing |
author_facet | Zhou, Hongshan Liu, Leping Zhao, Qinyu Jin, Xin Peng, Zhangzhe Wang, Wei Huang, Ling Xie, Yanyun Xu, Hui Tao, Lijian Xiao, Xiangcheng Nie, Wannian Liu, Fang Li, Li Yuan, Qiongjing |
author_sort | Zhou, Hongshan |
collection | PubMed |
description | BACKGROUND: Sepsis-associated acute kidney injury (S-AKI) is considered to be associated with high morbidity and mortality, a commonly accepted model to predict mortality is urged consequently. This study used a machine learning model to identify vital variables associated with mortality in S-AKI patients in the hospital and predict the risk of death in the hospital. We hope that this model can help identify high-risk patients early and reasonably allocate medical resources in the intensive care unit (ICU). METHODS: A total of 16,154 S-AKI patients from the Medical Information Mart for Intensive Care IV database were examined as the training set (80%) and the validation set (20%). Variables (129 in total) were collected, including basic patient information, diagnosis, clinical data, and medication records. We developed and validated machine learning models using 11 different algorithms and selected the one that performed the best. Afterward, recursive feature elimination was used to select key variables. Different indicators were used to compare the prediction performance of each model. The SHapley Additive exPlanations package was applied to interpret the best machine learning model in a web tool for clinicians to use. Finally, we collected clinical data of S-AKI patients from two hospitals for external validation. RESULTS: In this study, 15 critical variables were finally selected, namely, urine output, maximum blood urea nitrogen, rate of injection of norepinephrine, maximum anion gap, maximum creatinine, maximum red blood cell volume distribution width, minimum international normalized ratio, maximum heart rate, maximum temperature, maximum respiratory rate, minimum fraction of inspired O(2), minimum creatinine, minimum Glasgow Coma Scale, and diagnosis of diabetes and stroke. The categorical boosting algorithm model presented significantly better predictive performance [receiver operating characteristic (ROC): 0.83] than other models [accuracy (ACC): 75%, Youden index: 50%, sensitivity: 75%, specificity: 75%, F1 score: 0.56, positive predictive value (PPV): 44%, and negative predictive value (NPV): 92%]. External validation data from two hospitals in China were also well validated (ROC: 0.75). CONCLUSIONS: After selecting 15 crucial variables, a machine learning-based model for predicting the mortality of S-AKI patients was successfully established and the CatBoost model demonstrated best predictive performance. |
format | Online Article Text |
id | pubmed-10106833 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-101068332023-04-18 Machine learning for the prediction of all-cause mortality in patients with sepsis-associated acute kidney injury during hospitalization Zhou, Hongshan Liu, Leping Zhao, Qinyu Jin, Xin Peng, Zhangzhe Wang, Wei Huang, Ling Xie, Yanyun Xu, Hui Tao, Lijian Xiao, Xiangcheng Nie, Wannian Liu, Fang Li, Li Yuan, Qiongjing Front Immunol Immunology BACKGROUND: Sepsis-associated acute kidney injury (S-AKI) is considered to be associated with high morbidity and mortality, a commonly accepted model to predict mortality is urged consequently. This study used a machine learning model to identify vital variables associated with mortality in S-AKI patients in the hospital and predict the risk of death in the hospital. We hope that this model can help identify high-risk patients early and reasonably allocate medical resources in the intensive care unit (ICU). METHODS: A total of 16,154 S-AKI patients from the Medical Information Mart for Intensive Care IV database were examined as the training set (80%) and the validation set (20%). Variables (129 in total) were collected, including basic patient information, diagnosis, clinical data, and medication records. We developed and validated machine learning models using 11 different algorithms and selected the one that performed the best. Afterward, recursive feature elimination was used to select key variables. Different indicators were used to compare the prediction performance of each model. The SHapley Additive exPlanations package was applied to interpret the best machine learning model in a web tool for clinicians to use. Finally, we collected clinical data of S-AKI patients from two hospitals for external validation. RESULTS: In this study, 15 critical variables were finally selected, namely, urine output, maximum blood urea nitrogen, rate of injection of norepinephrine, maximum anion gap, maximum creatinine, maximum red blood cell volume distribution width, minimum international normalized ratio, maximum heart rate, maximum temperature, maximum respiratory rate, minimum fraction of inspired O(2), minimum creatinine, minimum Glasgow Coma Scale, and diagnosis of diabetes and stroke. The categorical boosting algorithm model presented significantly better predictive performance [receiver operating characteristic (ROC): 0.83] than other models [accuracy (ACC): 75%, Youden index: 50%, sensitivity: 75%, specificity: 75%, F1 score: 0.56, positive predictive value (PPV): 44%, and negative predictive value (NPV): 92%]. External validation data from two hospitals in China were also well validated (ROC: 0.75). CONCLUSIONS: After selecting 15 crucial variables, a machine learning-based model for predicting the mortality of S-AKI patients was successfully established and the CatBoost model demonstrated best predictive performance. Frontiers Media S.A. 2023-04-03 /pmc/articles/PMC10106833/ /pubmed/37077912 http://dx.doi.org/10.3389/fimmu.2023.1140755 Text en Copyright © 2023 Zhou, Liu, Zhao, Jin, Peng, Wang, Huang, Xie, Xu, Tao, Xiao, Nie, Liu, Li and Yuan https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Immunology Zhou, Hongshan Liu, Leping Zhao, Qinyu Jin, Xin Peng, Zhangzhe Wang, Wei Huang, Ling Xie, Yanyun Xu, Hui Tao, Lijian Xiao, Xiangcheng Nie, Wannian Liu, Fang Li, Li Yuan, Qiongjing Machine learning for the prediction of all-cause mortality in patients with sepsis-associated acute kidney injury during hospitalization |
title | Machine learning for the prediction of all-cause mortality in patients with sepsis-associated acute kidney injury during hospitalization |
title_full | Machine learning for the prediction of all-cause mortality in patients with sepsis-associated acute kidney injury during hospitalization |
title_fullStr | Machine learning for the prediction of all-cause mortality in patients with sepsis-associated acute kidney injury during hospitalization |
title_full_unstemmed | Machine learning for the prediction of all-cause mortality in patients with sepsis-associated acute kidney injury during hospitalization |
title_short | Machine learning for the prediction of all-cause mortality in patients with sepsis-associated acute kidney injury during hospitalization |
title_sort | machine learning for the prediction of all-cause mortality in patients with sepsis-associated acute kidney injury during hospitalization |
topic | Immunology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10106833/ https://www.ncbi.nlm.nih.gov/pubmed/37077912 http://dx.doi.org/10.3389/fimmu.2023.1140755 |
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