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The prognostic value of hedgehog signaling in bladder cancer by integrated bioinformatics
Bladder cancer is the second most prevalent urological malignancy. It's a big contributor to cancer-related deaths throughout the globe. Researchers discovered that the hedgehog signaling (HhS) pathway contributed to the onset and spread of many different kinds of cancer. Nevertheless, the pres...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10110581/ https://www.ncbi.nlm.nih.gov/pubmed/37069207 http://dx.doi.org/10.1038/s41598-023-33140-z |
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author | Yu, Xin Li, Wenge Feng, Yanjun Gao, Zhijie Wu, Qi Xia, Yue |
author_facet | Yu, Xin Li, Wenge Feng, Yanjun Gao, Zhijie Wu, Qi Xia, Yue |
author_sort | Yu, Xin |
collection | PubMed |
description | Bladder cancer is the second most prevalent urological malignancy. It's a big contributor to cancer-related deaths throughout the globe. Researchers discovered that the hedgehog signaling (HhS) pathway contributed to the onset and spread of many different kinds of cancer. Nevertheless, the present understanding of the function of HhS in the bladder cancer molecular landscape is incomplete. Raw data were gotten from the IMvigor210, the Gene Expression Omnibus, and The Cancer Genome Atlas databases. Bioinformatics was used to examine the HhS score of each sample, and the enrichment of differentially expressed genes (DEGs), differentiation characteristics, immunological infiltration, and metabolic activity. The HhS prognostic signature was developed with significant assistance from the least absolute shrinkage and selection operator regression and Cox regression. An HhS-related nomogram was developed to assist in the prediction of patients’ survival probability. We found that HhS was linked to poor prognosis in bladder cancer, and its activation was linked to the Basal subtype of bladder cancer. Bladder cancer with high HhS activity has higher glycolysis, nucleotide metabolism, amino acid metabolism, and other cancer-promoting metabolic activities. Furthermore, HhS mediates an immunosuppressive microenvironment in bladder cancer on the basis that HhS negatively correlates with the CD8 + T cells and correlates positively with immune checkpoints and T cell exhaustion scores. Finally, an HhS-related signature was developed for predicting the prognosis of patients with bladder cancer. Targeting HhS may be a potential therapy choice for bladder cancer. |
format | Online Article Text |
id | pubmed-10110581 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-101105812023-04-19 The prognostic value of hedgehog signaling in bladder cancer by integrated bioinformatics Yu, Xin Li, Wenge Feng, Yanjun Gao, Zhijie Wu, Qi Xia, Yue Sci Rep Article Bladder cancer is the second most prevalent urological malignancy. It's a big contributor to cancer-related deaths throughout the globe. Researchers discovered that the hedgehog signaling (HhS) pathway contributed to the onset and spread of many different kinds of cancer. Nevertheless, the present understanding of the function of HhS in the bladder cancer molecular landscape is incomplete. Raw data were gotten from the IMvigor210, the Gene Expression Omnibus, and The Cancer Genome Atlas databases. Bioinformatics was used to examine the HhS score of each sample, and the enrichment of differentially expressed genes (DEGs), differentiation characteristics, immunological infiltration, and metabolic activity. The HhS prognostic signature was developed with significant assistance from the least absolute shrinkage and selection operator regression and Cox regression. An HhS-related nomogram was developed to assist in the prediction of patients’ survival probability. We found that HhS was linked to poor prognosis in bladder cancer, and its activation was linked to the Basal subtype of bladder cancer. Bladder cancer with high HhS activity has higher glycolysis, nucleotide metabolism, amino acid metabolism, and other cancer-promoting metabolic activities. Furthermore, HhS mediates an immunosuppressive microenvironment in bladder cancer on the basis that HhS negatively correlates with the CD8 + T cells and correlates positively with immune checkpoints and T cell exhaustion scores. Finally, an HhS-related signature was developed for predicting the prognosis of patients with bladder cancer. Targeting HhS may be a potential therapy choice for bladder cancer. Nature Publishing Group UK 2023-04-17 /pmc/articles/PMC10110581/ /pubmed/37069207 http://dx.doi.org/10.1038/s41598-023-33140-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Yu, Xin Li, Wenge Feng, Yanjun Gao, Zhijie Wu, Qi Xia, Yue The prognostic value of hedgehog signaling in bladder cancer by integrated bioinformatics |
title | The prognostic value of hedgehog signaling in bladder cancer by integrated bioinformatics |
title_full | The prognostic value of hedgehog signaling in bladder cancer by integrated bioinformatics |
title_fullStr | The prognostic value of hedgehog signaling in bladder cancer by integrated bioinformatics |
title_full_unstemmed | The prognostic value of hedgehog signaling in bladder cancer by integrated bioinformatics |
title_short | The prognostic value of hedgehog signaling in bladder cancer by integrated bioinformatics |
title_sort | prognostic value of hedgehog signaling in bladder cancer by integrated bioinformatics |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10110581/ https://www.ncbi.nlm.nih.gov/pubmed/37069207 http://dx.doi.org/10.1038/s41598-023-33140-z |
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