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Predictive power of deep-learning segmentation based prognostication model in non-small cell lung cancer

PURPOSE: The study aims to create a model to predict survival outcomes for non-small cell lung cancer (NSCLC) after treatment with stereotactic body radiotherapy (SBRT) using deep-learning segmentation based prognostication (DESEP). METHODS: The DESEP model was trained using imaging from 108 patient...

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Autores principales: Gainey, Jordan C., He, Yusen, Zhu, Robert, Baek, Stephen S., Wu, Xiaodong, Buatti, John M., Allen, Bryan G., Smith, Brian J., Kim, Yusung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10110903/
https://www.ncbi.nlm.nih.gov/pubmed/37081986
http://dx.doi.org/10.3389/fonc.2023.868471
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author Gainey, Jordan C.
He, Yusen
Zhu, Robert
Baek, Stephen S.
Wu, Xiaodong
Buatti, John M.
Allen, Bryan G.
Smith, Brian J.
Kim, Yusung
author_facet Gainey, Jordan C.
He, Yusen
Zhu, Robert
Baek, Stephen S.
Wu, Xiaodong
Buatti, John M.
Allen, Bryan G.
Smith, Brian J.
Kim, Yusung
author_sort Gainey, Jordan C.
collection PubMed
description PURPOSE: The study aims to create a model to predict survival outcomes for non-small cell lung cancer (NSCLC) after treatment with stereotactic body radiotherapy (SBRT) using deep-learning segmentation based prognostication (DESEP). METHODS: The DESEP model was trained using imaging from 108 patients with NSCLC with various clinical stages and treatment histories. The model generated predictions based on unsupervised features learned by a deep-segmentation network from computed tomography imaging to categorize patients into high and low risk groups for overall survival (DESEP-predicted-OS), disease specific survival (DESEP-predicted-DSS), and local progression free survival (DESEP-predicted-LPFS). Serial assessments were also performed using auto-segmentation based volumetric RECISTv1.1 and computer-based unidimensional RECISTv1.1 patients was performed. RESULTS: There was a concordance between the DESEP-predicted-LPFS risk category and manually calculated RECISTv1.1 (φ=0.544, p=0.001). Neither the auto-segmentation based volumetric RECISTv1.1 nor the computer-based unidimensional RECISTv1.1 correlated with manual RECISTv1.1 (p=0.081 and p=0.144, respectively). While manual RECISTv1.1 correlated with LPFS (HR=6.97,3.51-13.85, c=0.70, p<0.001), it could not provide insight regarding DSS (p=0.942) or OS (p=0.662). In contrast, the DESEP-predicted methods were predictive of LPFS (HR=3.58, 1.66-7.18, c=0.60, p<0.001), OS (HR=6.31, 3.65-10.93, c=0.71, p<0.001) and DSS (HR=9.25, 4.50-19.02, c=0.69, p<0.001). The promising results of the DESEP model were reproduced for the independent, external datasets of Stanford University, classifying survival and ‘dead’ group in their Kaplan-Meyer curves (p = 0.019). CONCLUSION: Deep-learning segmentation based prognostication can predict LPFS as well as OS, and DSS after SBRT for NSCLC. It can be used in conjunction with current standard of care, manual RECISTv1.1 to provide additional insights regarding DSS and OS in NSCLC patients receiving SBRT. SUMMARY: While current standard of care, manual RECISTv1.1 correlated with local progression free survival (LPFS) (HR=6.97,3.51-13.85, c=0.70, p<0.001), it could not provide insight regarding disease specific survival (DSS) (p=0.942) or overall survival (OS) (p=0.662). In contrast, the deep-learning segmentation based prognostication (DESEP)-predicted methods were predictive of LPFS (HR=3.58, 1.66-7.18, c=0.60, p<0.001), OS (HR=6.31, 3.65-10.93, c=0.71, p<0.001) and DSS (HR=9.25, 4.50-19.02, c=0.69, p<0.001). DESEP can be used in conjunction with current standard of care, manual RECISTv1.1 to provide additional insights regarding DSS and OS in NSCLC patients.
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spelling pubmed-101109032023-04-19 Predictive power of deep-learning segmentation based prognostication model in non-small cell lung cancer Gainey, Jordan C. He, Yusen Zhu, Robert Baek, Stephen S. Wu, Xiaodong Buatti, John M. Allen, Bryan G. Smith, Brian J. Kim, Yusung Front Oncol Oncology PURPOSE: The study aims to create a model to predict survival outcomes for non-small cell lung cancer (NSCLC) after treatment with stereotactic body radiotherapy (SBRT) using deep-learning segmentation based prognostication (DESEP). METHODS: The DESEP model was trained using imaging from 108 patients with NSCLC with various clinical stages and treatment histories. The model generated predictions based on unsupervised features learned by a deep-segmentation network from computed tomography imaging to categorize patients into high and low risk groups for overall survival (DESEP-predicted-OS), disease specific survival (DESEP-predicted-DSS), and local progression free survival (DESEP-predicted-LPFS). Serial assessments were also performed using auto-segmentation based volumetric RECISTv1.1 and computer-based unidimensional RECISTv1.1 patients was performed. RESULTS: There was a concordance between the DESEP-predicted-LPFS risk category and manually calculated RECISTv1.1 (φ=0.544, p=0.001). Neither the auto-segmentation based volumetric RECISTv1.1 nor the computer-based unidimensional RECISTv1.1 correlated with manual RECISTv1.1 (p=0.081 and p=0.144, respectively). While manual RECISTv1.1 correlated with LPFS (HR=6.97,3.51-13.85, c=0.70, p<0.001), it could not provide insight regarding DSS (p=0.942) or OS (p=0.662). In contrast, the DESEP-predicted methods were predictive of LPFS (HR=3.58, 1.66-7.18, c=0.60, p<0.001), OS (HR=6.31, 3.65-10.93, c=0.71, p<0.001) and DSS (HR=9.25, 4.50-19.02, c=0.69, p<0.001). The promising results of the DESEP model were reproduced for the independent, external datasets of Stanford University, classifying survival and ‘dead’ group in their Kaplan-Meyer curves (p = 0.019). CONCLUSION: Deep-learning segmentation based prognostication can predict LPFS as well as OS, and DSS after SBRT for NSCLC. It can be used in conjunction with current standard of care, manual RECISTv1.1 to provide additional insights regarding DSS and OS in NSCLC patients receiving SBRT. SUMMARY: While current standard of care, manual RECISTv1.1 correlated with local progression free survival (LPFS) (HR=6.97,3.51-13.85, c=0.70, p<0.001), it could not provide insight regarding disease specific survival (DSS) (p=0.942) or overall survival (OS) (p=0.662). In contrast, the deep-learning segmentation based prognostication (DESEP)-predicted methods were predictive of LPFS (HR=3.58, 1.66-7.18, c=0.60, p<0.001), OS (HR=6.31, 3.65-10.93, c=0.71, p<0.001) and DSS (HR=9.25, 4.50-19.02, c=0.69, p<0.001). DESEP can be used in conjunction with current standard of care, manual RECISTv1.1 to provide additional insights regarding DSS and OS in NSCLC patients. Frontiers Media S.A. 2023-04-04 /pmc/articles/PMC10110903/ /pubmed/37081986 http://dx.doi.org/10.3389/fonc.2023.868471 Text en Copyright © 2023 Gainey, He, Zhu, Baek, Wu, Buatti, Allen, Smith and Kim https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Gainey, Jordan C.
He, Yusen
Zhu, Robert
Baek, Stephen S.
Wu, Xiaodong
Buatti, John M.
Allen, Bryan G.
Smith, Brian J.
Kim, Yusung
Predictive power of deep-learning segmentation based prognostication model in non-small cell lung cancer
title Predictive power of deep-learning segmentation based prognostication model in non-small cell lung cancer
title_full Predictive power of deep-learning segmentation based prognostication model in non-small cell lung cancer
title_fullStr Predictive power of deep-learning segmentation based prognostication model in non-small cell lung cancer
title_full_unstemmed Predictive power of deep-learning segmentation based prognostication model in non-small cell lung cancer
title_short Predictive power of deep-learning segmentation based prognostication model in non-small cell lung cancer
title_sort predictive power of deep-learning segmentation based prognostication model in non-small cell lung cancer
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10110903/
https://www.ncbi.nlm.nih.gov/pubmed/37081986
http://dx.doi.org/10.3389/fonc.2023.868471
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