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Machine-learning predicts time-series prognosis factors in metastatic prostate cancer patients treated with androgen deprivation therapy

Machine learning technology is expected to support diagnosis and prognosis prediction in medicine. We used machine learning to construct a new prognostic prediction model for prostate cancer patients based on longitudinal data obtained from age at diagnosis, peripheral blood and urine tests of 340 p...

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Autores principales: Saito, Shinpei, Sakamoto, Shinichi, Higuchi, Kosuke, Sato, Kodai, Zhao, Xue, Wakai, Ken, Kanesaka, Manato, Kamada, Shuhei, Takeuchi, Nobuyoshi, Sazuka, Tomokazu, Imamura, Yusuke, Anzai, Naohiko, Ichikawa, Tomohiko, Kawakami, Eiryo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10113215/
https://www.ncbi.nlm.nih.gov/pubmed/37072487
http://dx.doi.org/10.1038/s41598-023-32987-6
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author Saito, Shinpei
Sakamoto, Shinichi
Higuchi, Kosuke
Sato, Kodai
Zhao, Xue
Wakai, Ken
Kanesaka, Manato
Kamada, Shuhei
Takeuchi, Nobuyoshi
Sazuka, Tomokazu
Imamura, Yusuke
Anzai, Naohiko
Ichikawa, Tomohiko
Kawakami, Eiryo
author_facet Saito, Shinpei
Sakamoto, Shinichi
Higuchi, Kosuke
Sato, Kodai
Zhao, Xue
Wakai, Ken
Kanesaka, Manato
Kamada, Shuhei
Takeuchi, Nobuyoshi
Sazuka, Tomokazu
Imamura, Yusuke
Anzai, Naohiko
Ichikawa, Tomohiko
Kawakami, Eiryo
author_sort Saito, Shinpei
collection PubMed
description Machine learning technology is expected to support diagnosis and prognosis prediction in medicine. We used machine learning to construct a new prognostic prediction model for prostate cancer patients based on longitudinal data obtained from age at diagnosis, peripheral blood and urine tests of 340 prostate cancer patients. Random survival forest (RSF) and survival tree were used for machine learning. In the time-series prognostic prediction model for metastatic prostate cancer patients, the RSF model showed better prediction accuracy than the conventional Cox proportional hazards model for almost all time periods of progression-free survival (PFS), overall survival (OS) and cancer-specific survival (CSS). Based on the RSF model, we created a clinically applicable prognostic prediction model using survival trees for OS and CSS by combining the values of lactate dehydrogenase (LDH) before starting treatment and alkaline phosphatase (ALP) at 120 days after treatment. Machine learning provides useful information for predicting the prognosis of metastatic prostate cancer prior to treatment intervention by considering the nonlinear and combined impacts of multiple features. The addition of data after the start of treatment would allow for more precise prognostic risk assessment of patients and would be beneficial for subsequent treatment selection.
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spelling pubmed-101132152023-04-20 Machine-learning predicts time-series prognosis factors in metastatic prostate cancer patients treated with androgen deprivation therapy Saito, Shinpei Sakamoto, Shinichi Higuchi, Kosuke Sato, Kodai Zhao, Xue Wakai, Ken Kanesaka, Manato Kamada, Shuhei Takeuchi, Nobuyoshi Sazuka, Tomokazu Imamura, Yusuke Anzai, Naohiko Ichikawa, Tomohiko Kawakami, Eiryo Sci Rep Article Machine learning technology is expected to support diagnosis and prognosis prediction in medicine. We used machine learning to construct a new prognostic prediction model for prostate cancer patients based on longitudinal data obtained from age at diagnosis, peripheral blood and urine tests of 340 prostate cancer patients. Random survival forest (RSF) and survival tree were used for machine learning. In the time-series prognostic prediction model for metastatic prostate cancer patients, the RSF model showed better prediction accuracy than the conventional Cox proportional hazards model for almost all time periods of progression-free survival (PFS), overall survival (OS) and cancer-specific survival (CSS). Based on the RSF model, we created a clinically applicable prognostic prediction model using survival trees for OS and CSS by combining the values of lactate dehydrogenase (LDH) before starting treatment and alkaline phosphatase (ALP) at 120 days after treatment. Machine learning provides useful information for predicting the prognosis of metastatic prostate cancer prior to treatment intervention by considering the nonlinear and combined impacts of multiple features. The addition of data after the start of treatment would allow for more precise prognostic risk assessment of patients and would be beneficial for subsequent treatment selection. Nature Publishing Group UK 2023-04-18 /pmc/articles/PMC10113215/ /pubmed/37072487 http://dx.doi.org/10.1038/s41598-023-32987-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Saito, Shinpei
Sakamoto, Shinichi
Higuchi, Kosuke
Sato, Kodai
Zhao, Xue
Wakai, Ken
Kanesaka, Manato
Kamada, Shuhei
Takeuchi, Nobuyoshi
Sazuka, Tomokazu
Imamura, Yusuke
Anzai, Naohiko
Ichikawa, Tomohiko
Kawakami, Eiryo
Machine-learning predicts time-series prognosis factors in metastatic prostate cancer patients treated with androgen deprivation therapy
title Machine-learning predicts time-series prognosis factors in metastatic prostate cancer patients treated with androgen deprivation therapy
title_full Machine-learning predicts time-series prognosis factors in metastatic prostate cancer patients treated with androgen deprivation therapy
title_fullStr Machine-learning predicts time-series prognosis factors in metastatic prostate cancer patients treated with androgen deprivation therapy
title_full_unstemmed Machine-learning predicts time-series prognosis factors in metastatic prostate cancer patients treated with androgen deprivation therapy
title_short Machine-learning predicts time-series prognosis factors in metastatic prostate cancer patients treated with androgen deprivation therapy
title_sort machine-learning predicts time-series prognosis factors in metastatic prostate cancer patients treated with androgen deprivation therapy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10113215/
https://www.ncbi.nlm.nih.gov/pubmed/37072487
http://dx.doi.org/10.1038/s41598-023-32987-6
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