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Effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content
Fourier transform mid infrared (FT-MIR) spectroscopy combined with modeling techniques has been studied as a useful tool for multivariate chemical analysis in agricultural research. A drawback of this method is the sample preparation requirement, in which samples must be dried and fine ground for ac...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10113243/ https://www.ncbi.nlm.nih.gov/pubmed/37072478 http://dx.doi.org/10.1038/s41598-023-33558-5 |
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author | Whatley, Caleb R. Wijewardane, Nuwan K. Bheemanahalli, Raju Reddy, K. Raja Lu, Yuzhen |
author_facet | Whatley, Caleb R. Wijewardane, Nuwan K. Bheemanahalli, Raju Reddy, K. Raja Lu, Yuzhen |
author_sort | Whatley, Caleb R. |
collection | PubMed |
description | Fourier transform mid infrared (FT-MIR) spectroscopy combined with modeling techniques has been studied as a useful tool for multivariate chemical analysis in agricultural research. A drawback of this method is the sample preparation requirement, in which samples must be dried and fine ground for accurate model calibrations. For research involving large sample sets, this may dramatically increase the time and cost of analysis. This study investigates the effect of fine grinding on model performance using leaf tissue from a variety of crop species. Dried leaf samples (N = 300) from various environmental conditions were obtained with data on 11 nutrients measured using chemical methods. The samples were scanned with attenuated total reflectance (ATR) and diffuse reflectance (DRIFT) FT-MIR techniques. Scanning was repeated after fine grinding for 2, 5, and 10 min. The spectra were analyzed for the 11 nutrients using partial least squares regression with a 75%/25% split for calibration and validation and repeated for 50 iterations. All analytes except for boron, iron, and zinc were well-modeled (average R(2) > 0.7), with higher R(2) values on ATR spectra. The 5 min level of fine grinding was found to be most optimal considering overall model performance and sample preparation time. |
format | Online Article Text |
id | pubmed-10113243 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-101132432023-04-20 Effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content Whatley, Caleb R. Wijewardane, Nuwan K. Bheemanahalli, Raju Reddy, K. Raja Lu, Yuzhen Sci Rep Article Fourier transform mid infrared (FT-MIR) spectroscopy combined with modeling techniques has been studied as a useful tool for multivariate chemical analysis in agricultural research. A drawback of this method is the sample preparation requirement, in which samples must be dried and fine ground for accurate model calibrations. For research involving large sample sets, this may dramatically increase the time and cost of analysis. This study investigates the effect of fine grinding on model performance using leaf tissue from a variety of crop species. Dried leaf samples (N = 300) from various environmental conditions were obtained with data on 11 nutrients measured using chemical methods. The samples were scanned with attenuated total reflectance (ATR) and diffuse reflectance (DRIFT) FT-MIR techniques. Scanning was repeated after fine grinding for 2, 5, and 10 min. The spectra were analyzed for the 11 nutrients using partial least squares regression with a 75%/25% split for calibration and validation and repeated for 50 iterations. All analytes except for boron, iron, and zinc were well-modeled (average R(2) > 0.7), with higher R(2) values on ATR spectra. The 5 min level of fine grinding was found to be most optimal considering overall model performance and sample preparation time. Nature Publishing Group UK 2023-04-18 /pmc/articles/PMC10113243/ /pubmed/37072478 http://dx.doi.org/10.1038/s41598-023-33558-5 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Whatley, Caleb R. Wijewardane, Nuwan K. Bheemanahalli, Raju Reddy, K. Raja Lu, Yuzhen Effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content |
title | Effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content |
title_full | Effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content |
title_fullStr | Effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content |
title_full_unstemmed | Effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content |
title_short | Effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content |
title_sort | effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10113243/ https://www.ncbi.nlm.nih.gov/pubmed/37072478 http://dx.doi.org/10.1038/s41598-023-33558-5 |
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