Cargando…

Anoikis resistance of small airway epithelium is involved in the progression of chronic obstructive pulmonary disease

BACKGROUND: Anoikis resistance is recognized as a crucial step in the metastasis of cancer cells. Most epithelial tumors are distinguished by the ability of epithelial cells to abscond anoikis when detached from the extracellular matrix. However, no study has investigated the involvement of anoikis...

Descripción completa

Detalles Bibliográficos
Autores principales: Chen, Dian, Yi, Rongbing, Hong, Weifeng, Wang, Kai, Chen, Yahong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10113535/
https://www.ncbi.nlm.nih.gov/pubmed/37090717
http://dx.doi.org/10.3389/fimmu.2023.1155478
_version_ 1785027860290863104
author Chen, Dian
Yi, Rongbing
Hong, Weifeng
Wang, Kai
Chen, Yahong
author_facet Chen, Dian
Yi, Rongbing
Hong, Weifeng
Wang, Kai
Chen, Yahong
author_sort Chen, Dian
collection PubMed
description BACKGROUND: Anoikis resistance is recognized as a crucial step in the metastasis of cancer cells. Most epithelial tumors are distinguished by the ability of epithelial cells to abscond anoikis when detached from the extracellular matrix. However, no study has investigated the involvement of anoikis in the small airway epithelium (SAE) of chronic obstructive pulmonary disease (COPD). METHODS: Anoikis-related genes (ANRGs) exhibiting differential expression in COPD were identified using microarray datasets obtained from the Gene Expression Omnibus (GEO) database. Unsupervised clustering was performed to classify COPD patients into anoikis-related subtypes. Gene Ontology (GO) analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, gene set enrichment analysis (GSEA), and gene set variation analysis (GSVA) were used to annotate the functions between different subtypes. Differential expression analysis and weighted gene co-expression network analysis (WGCNA) were leveraged to identify key molecules. The relative proportion of infiltrating immune cells in the SAE was quantified using the CIBERSORT and ssGSEA computational algorithms, and the correlation between key molecules and immune cell abundance was analyzed. The expression of key molecules in BEAS-2B cells exposed to cigarette smoke extract (CSE) was validated using qRT-PCR. RESULTS: A total of 25 ANRGs exhibited differential expression in the SAE of COPD patients, based on which two subtypes of COPD patients with distinct anoikis patterns were identified. COPD patients with anoikis resistance had more advanced GOLD stages and cigarette consumption. Functional annotations revealed a different immune status between COPD patients with pro-anoikis and anoikis resistance. Tenomodulin (TNMD) and long intergenic non-protein coding RNA 656 (LINC00656) were subsequently identified as key molecules involved in this process, and a close correlation between TNMD and the infiltrating immune cells was observed, such as activated CD4(+) memory T cells, M1 macrophages, and activated NK cells. Further enrichment analyses clarified the relationship between TNMD and the inflammatory and apoptotic signaling pathway as the potential mechanism for regulating anoikis. In vitro experiments showed a dramatic upregulation of TNMD and LINC00656 in BEAS-2B cells when exposed to 3% CSE for 48 hours. CONCLUSION: TNMD contributes to the progression of COPD by inducing anoikis resistance in SAE, which is intimately associated with the immune microenvironment.
format Online
Article
Text
id pubmed-10113535
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-101135352023-04-20 Anoikis resistance of small airway epithelium is involved in the progression of chronic obstructive pulmonary disease Chen, Dian Yi, Rongbing Hong, Weifeng Wang, Kai Chen, Yahong Front Immunol Immunology BACKGROUND: Anoikis resistance is recognized as a crucial step in the metastasis of cancer cells. Most epithelial tumors are distinguished by the ability of epithelial cells to abscond anoikis when detached from the extracellular matrix. However, no study has investigated the involvement of anoikis in the small airway epithelium (SAE) of chronic obstructive pulmonary disease (COPD). METHODS: Anoikis-related genes (ANRGs) exhibiting differential expression in COPD were identified using microarray datasets obtained from the Gene Expression Omnibus (GEO) database. Unsupervised clustering was performed to classify COPD patients into anoikis-related subtypes. Gene Ontology (GO) analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, gene set enrichment analysis (GSEA), and gene set variation analysis (GSVA) were used to annotate the functions between different subtypes. Differential expression analysis and weighted gene co-expression network analysis (WGCNA) were leveraged to identify key molecules. The relative proportion of infiltrating immune cells in the SAE was quantified using the CIBERSORT and ssGSEA computational algorithms, and the correlation between key molecules and immune cell abundance was analyzed. The expression of key molecules in BEAS-2B cells exposed to cigarette smoke extract (CSE) was validated using qRT-PCR. RESULTS: A total of 25 ANRGs exhibited differential expression in the SAE of COPD patients, based on which two subtypes of COPD patients with distinct anoikis patterns were identified. COPD patients with anoikis resistance had more advanced GOLD stages and cigarette consumption. Functional annotations revealed a different immune status between COPD patients with pro-anoikis and anoikis resistance. Tenomodulin (TNMD) and long intergenic non-protein coding RNA 656 (LINC00656) were subsequently identified as key molecules involved in this process, and a close correlation between TNMD and the infiltrating immune cells was observed, such as activated CD4(+) memory T cells, M1 macrophages, and activated NK cells. Further enrichment analyses clarified the relationship between TNMD and the inflammatory and apoptotic signaling pathway as the potential mechanism for regulating anoikis. In vitro experiments showed a dramatic upregulation of TNMD and LINC00656 in BEAS-2B cells when exposed to 3% CSE for 48 hours. CONCLUSION: TNMD contributes to the progression of COPD by inducing anoikis resistance in SAE, which is intimately associated with the immune microenvironment. Frontiers Media S.A. 2023-04-05 /pmc/articles/PMC10113535/ /pubmed/37090717 http://dx.doi.org/10.3389/fimmu.2023.1155478 Text en Copyright © 2023 Chen, Yi, Hong, Wang and Chen https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Chen, Dian
Yi, Rongbing
Hong, Weifeng
Wang, Kai
Chen, Yahong
Anoikis resistance of small airway epithelium is involved in the progression of chronic obstructive pulmonary disease
title Anoikis resistance of small airway epithelium is involved in the progression of chronic obstructive pulmonary disease
title_full Anoikis resistance of small airway epithelium is involved in the progression of chronic obstructive pulmonary disease
title_fullStr Anoikis resistance of small airway epithelium is involved in the progression of chronic obstructive pulmonary disease
title_full_unstemmed Anoikis resistance of small airway epithelium is involved in the progression of chronic obstructive pulmonary disease
title_short Anoikis resistance of small airway epithelium is involved in the progression of chronic obstructive pulmonary disease
title_sort anoikis resistance of small airway epithelium is involved in the progression of chronic obstructive pulmonary disease
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10113535/
https://www.ncbi.nlm.nih.gov/pubmed/37090717
http://dx.doi.org/10.3389/fimmu.2023.1155478
work_keys_str_mv AT chendian anoikisresistanceofsmallairwayepitheliumisinvolvedintheprogressionofchronicobstructivepulmonarydisease
AT yirongbing anoikisresistanceofsmallairwayepitheliumisinvolvedintheprogressionofchronicobstructivepulmonarydisease
AT hongweifeng anoikisresistanceofsmallairwayepitheliumisinvolvedintheprogressionofchronicobstructivepulmonarydisease
AT wangkai anoikisresistanceofsmallairwayepitheliumisinvolvedintheprogressionofchronicobstructivepulmonarydisease
AT chenyahong anoikisresistanceofsmallairwayepitheliumisinvolvedintheprogressionofchronicobstructivepulmonarydisease