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Adaptive data-driven selection of sequences of biological and cognitive markers in pre-clinical diagnosis of dementia
Effective clinical decision procedures must balance multiple competing objectives such as time-to-decision, acquisition costs, and accuracy. We describe and evaluate POSEIDON, a data-driven method for PrOspective SEquentIal DiagnOsis with Neutral zones to individualize clinical classifications. We e...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10115887/ https://www.ncbi.nlm.nih.gov/pubmed/37076487 http://dx.doi.org/10.1038/s41598-023-32867-z |
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author | Wyss, Patric Ginsbourger, David Shou, Haochang Davatzikos, Christos Klöppel, Stefan Abdulkadir, Ahmed |
author_facet | Wyss, Patric Ginsbourger, David Shou, Haochang Davatzikos, Christos Klöppel, Stefan Abdulkadir, Ahmed |
author_sort | Wyss, Patric |
collection | PubMed |
description | Effective clinical decision procedures must balance multiple competing objectives such as time-to-decision, acquisition costs, and accuracy. We describe and evaluate POSEIDON, a data-driven method for PrOspective SEquentIal DiagnOsis with Neutral zones to individualize clinical classifications. We evaluated the framework with an application in which the algorithm sequentially proposes to include cognitive, imaging, or molecular markers if a sufficiently more accurate prognosis of clinical decline to manifest Alzheimer’s disease is expected. Over a wide range of cost parameter data-driven tuning lead to quantitatively lower total cost compared to ad hoc fixed sets of measurements. The classification accuracy based on all longitudinal data from participants that was acquired over 4.8 years on average was 0.89. The sequential algorithm selected 14 percent of available measurements and concluded after an average follow-up time of 0.74 years at the expense of 0.05 lower accuracy. Sequential classifiers were competitive from a multi-objective perspective since they could dominate fixed sets of measurements by making fewer errors using less resources. Nevertheless, the trade-off of competing objectives depends on inherently subjective prescribed cost parameters. Thus, despite the effectiveness of the method, the implementation into consequential clinical applications will remain controversial and evolve around the choice of cost parameters. |
format | Online Article Text |
id | pubmed-10115887 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-101158872023-04-21 Adaptive data-driven selection of sequences of biological and cognitive markers in pre-clinical diagnosis of dementia Wyss, Patric Ginsbourger, David Shou, Haochang Davatzikos, Christos Klöppel, Stefan Abdulkadir, Ahmed Sci Rep Article Effective clinical decision procedures must balance multiple competing objectives such as time-to-decision, acquisition costs, and accuracy. We describe and evaluate POSEIDON, a data-driven method for PrOspective SEquentIal DiagnOsis with Neutral zones to individualize clinical classifications. We evaluated the framework with an application in which the algorithm sequentially proposes to include cognitive, imaging, or molecular markers if a sufficiently more accurate prognosis of clinical decline to manifest Alzheimer’s disease is expected. Over a wide range of cost parameter data-driven tuning lead to quantitatively lower total cost compared to ad hoc fixed sets of measurements. The classification accuracy based on all longitudinal data from participants that was acquired over 4.8 years on average was 0.89. The sequential algorithm selected 14 percent of available measurements and concluded after an average follow-up time of 0.74 years at the expense of 0.05 lower accuracy. Sequential classifiers were competitive from a multi-objective perspective since they could dominate fixed sets of measurements by making fewer errors using less resources. Nevertheless, the trade-off of competing objectives depends on inherently subjective prescribed cost parameters. Thus, despite the effectiveness of the method, the implementation into consequential clinical applications will remain controversial and evolve around the choice of cost parameters. Nature Publishing Group UK 2023-04-19 /pmc/articles/PMC10115887/ /pubmed/37076487 http://dx.doi.org/10.1038/s41598-023-32867-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Wyss, Patric Ginsbourger, David Shou, Haochang Davatzikos, Christos Klöppel, Stefan Abdulkadir, Ahmed Adaptive data-driven selection of sequences of biological and cognitive markers in pre-clinical diagnosis of dementia |
title | Adaptive data-driven selection of sequences of biological and cognitive markers in pre-clinical diagnosis of dementia |
title_full | Adaptive data-driven selection of sequences of biological and cognitive markers in pre-clinical diagnosis of dementia |
title_fullStr | Adaptive data-driven selection of sequences of biological and cognitive markers in pre-clinical diagnosis of dementia |
title_full_unstemmed | Adaptive data-driven selection of sequences of biological and cognitive markers in pre-clinical diagnosis of dementia |
title_short | Adaptive data-driven selection of sequences of biological and cognitive markers in pre-clinical diagnosis of dementia |
title_sort | adaptive data-driven selection of sequences of biological and cognitive markers in pre-clinical diagnosis of dementia |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10115887/ https://www.ncbi.nlm.nih.gov/pubmed/37076487 http://dx.doi.org/10.1038/s41598-023-32867-z |
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