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Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients
BACKGROUND: Various variants of the miR-219-1 gene are one of the first genes associated with NSCLC prognosis in the literature. OBJECTIVES: We aimed to genotype two different variants of the miR-219-1 gene and to investigate to using of the result as a biomarker in the diagnosis and treatment of NS...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Makerere Medical School
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10117453/ https://www.ncbi.nlm.nih.gov/pubmed/37092101 http://dx.doi.org/10.4314/ahs.v22i4.6 |
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author | Tas, Sevgi Kalkanli Coskunpinar, Ender Yildiz, Pinar Bayraktaroğlu, Mesut Kose, Tuba Altunkanat, Derya Kirkik, Duygu Tukenmez, Mustafa |
author_facet | Tas, Sevgi Kalkanli Coskunpinar, Ender Yildiz, Pinar Bayraktaroğlu, Mesut Kose, Tuba Altunkanat, Derya Kirkik, Duygu Tukenmez, Mustafa |
author_sort | Tas, Sevgi Kalkanli |
collection | PubMed |
description | BACKGROUND: Various variants of the miR-219-1 gene are one of the first genes associated with NSCLC prognosis in the literature. OBJECTIVES: We aimed to genotype two different variants of the miR-219-1 gene and to investigate to using of the result as a biomarker in the diagnosis and treatment of NSCLC. MATERIALS AND METHODS: The patients were chosen according to International NSCLC criteria and genomic DNA was isolated from blood (138 patients and 100 healthy individuals). Then qRT-PCR was applied to determine the rs213210 and rs421446 variants of miR-219-1 gene polymorphisms. Allele and genotype frequencies were compared using Pearson's chi-square and Fisher's exact tests test. RESULTS: We found that TT genotype (p=0,381) in rs213210 compared with CC genotype (p=0,165) and CC genotype (p=0,823) in rs421446 compared with TT genotype (p=0,537) did not show a significantly increased risk of NSCLC. There is no relationship between polymorphisms in miR-219-1 and the outcome of NSCLC. CONCLUSION: miRNA single nucleotide polymorphisms can be used as genetic biomarkers to predict cancer susceptibility, early diagnosis, and prognosis. Our study has shown that two variants of miR-219-1 were not related to NSCLC in the Turkish population. The reason for this can be differences in ethnicity, regions, and background of population and these differences could lead to various outcomes. |
format | Online Article Text |
id | pubmed-10117453 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Makerere Medical School |
record_format | MEDLINE/PubMed |
spelling | pubmed-101174532023-04-21 Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients Tas, Sevgi Kalkanli Coskunpinar, Ender Yildiz, Pinar Bayraktaroğlu, Mesut Kose, Tuba Altunkanat, Derya Kirkik, Duygu Tukenmez, Mustafa Afr Health Sci Articles BACKGROUND: Various variants of the miR-219-1 gene are one of the first genes associated with NSCLC prognosis in the literature. OBJECTIVES: We aimed to genotype two different variants of the miR-219-1 gene and to investigate to using of the result as a biomarker in the diagnosis and treatment of NSCLC. MATERIALS AND METHODS: The patients were chosen according to International NSCLC criteria and genomic DNA was isolated from blood (138 patients and 100 healthy individuals). Then qRT-PCR was applied to determine the rs213210 and rs421446 variants of miR-219-1 gene polymorphisms. Allele and genotype frequencies were compared using Pearson's chi-square and Fisher's exact tests test. RESULTS: We found that TT genotype (p=0,381) in rs213210 compared with CC genotype (p=0,165) and CC genotype (p=0,823) in rs421446 compared with TT genotype (p=0,537) did not show a significantly increased risk of NSCLC. There is no relationship between polymorphisms in miR-219-1 and the outcome of NSCLC. CONCLUSION: miRNA single nucleotide polymorphisms can be used as genetic biomarkers to predict cancer susceptibility, early diagnosis, and prognosis. Our study has shown that two variants of miR-219-1 were not related to NSCLC in the Turkish population. The reason for this can be differences in ethnicity, regions, and background of population and these differences could lead to various outcomes. Makerere Medical School 2022-12 /pmc/articles/PMC10117453/ /pubmed/37092101 http://dx.doi.org/10.4314/ahs.v22i4.6 Text en © 2022 Tas SK et al. https://creativecommons.org/licenses/by/4.0/Licensee African Health Sciences. This is an Open Access article distributed under the terms of the Creative commons Attribution License (https://creativecommons.org/licenses/BY/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Tas, Sevgi Kalkanli Coskunpinar, Ender Yildiz, Pinar Bayraktaroğlu, Mesut Kose, Tuba Altunkanat, Derya Kirkik, Duygu Tukenmez, Mustafa Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients |
title | Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients |
title_full | Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients |
title_fullStr | Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients |
title_full_unstemmed | Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients |
title_short | Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients |
title_sort | investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10117453/ https://www.ncbi.nlm.nih.gov/pubmed/37092101 http://dx.doi.org/10.4314/ahs.v22i4.6 |
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