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Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients

BACKGROUND: Various variants of the miR-219-1 gene are one of the first genes associated with NSCLC prognosis in the literature. OBJECTIVES: We aimed to genotype two different variants of the miR-219-1 gene and to investigate to using of the result as a biomarker in the diagnosis and treatment of NS...

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Autores principales: Tas, Sevgi Kalkanli, Coskunpinar, Ender, Yildiz, Pinar, Bayraktaroğlu, Mesut, Kose, Tuba, Altunkanat, Derya, Kirkik, Duygu, Tukenmez, Mustafa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Makerere Medical School 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10117453/
https://www.ncbi.nlm.nih.gov/pubmed/37092101
http://dx.doi.org/10.4314/ahs.v22i4.6
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author Tas, Sevgi Kalkanli
Coskunpinar, Ender
Yildiz, Pinar
Bayraktaroğlu, Mesut
Kose, Tuba
Altunkanat, Derya
Kirkik, Duygu
Tukenmez, Mustafa
author_facet Tas, Sevgi Kalkanli
Coskunpinar, Ender
Yildiz, Pinar
Bayraktaroğlu, Mesut
Kose, Tuba
Altunkanat, Derya
Kirkik, Duygu
Tukenmez, Mustafa
author_sort Tas, Sevgi Kalkanli
collection PubMed
description BACKGROUND: Various variants of the miR-219-1 gene are one of the first genes associated with NSCLC prognosis in the literature. OBJECTIVES: We aimed to genotype two different variants of the miR-219-1 gene and to investigate to using of the result as a biomarker in the diagnosis and treatment of NSCLC. MATERIALS AND METHODS: The patients were chosen according to International NSCLC criteria and genomic DNA was isolated from blood (138 patients and 100 healthy individuals). Then qRT-PCR was applied to determine the rs213210 and rs421446 variants of miR-219-1 gene polymorphisms. Allele and genotype frequencies were compared using Pearson's chi-square and Fisher's exact tests test. RESULTS: We found that TT genotype (p=0,381) in rs213210 compared with CC genotype (p=0,165) and CC genotype (p=0,823) in rs421446 compared with TT genotype (p=0,537) did not show a significantly increased risk of NSCLC. There is no relationship between polymorphisms in miR-219-1 and the outcome of NSCLC. CONCLUSION: miRNA single nucleotide polymorphisms can be used as genetic biomarkers to predict cancer susceptibility, early diagnosis, and prognosis. Our study has shown that two variants of miR-219-1 were not related to NSCLC in the Turkish population. The reason for this can be differences in ethnicity, regions, and background of population and these differences could lead to various outcomes.
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spelling pubmed-101174532023-04-21 Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients Tas, Sevgi Kalkanli Coskunpinar, Ender Yildiz, Pinar Bayraktaroğlu, Mesut Kose, Tuba Altunkanat, Derya Kirkik, Duygu Tukenmez, Mustafa Afr Health Sci Articles BACKGROUND: Various variants of the miR-219-1 gene are one of the first genes associated with NSCLC prognosis in the literature. OBJECTIVES: We aimed to genotype two different variants of the miR-219-1 gene and to investigate to using of the result as a biomarker in the diagnosis and treatment of NSCLC. MATERIALS AND METHODS: The patients were chosen according to International NSCLC criteria and genomic DNA was isolated from blood (138 patients and 100 healthy individuals). Then qRT-PCR was applied to determine the rs213210 and rs421446 variants of miR-219-1 gene polymorphisms. Allele and genotype frequencies were compared using Pearson's chi-square and Fisher's exact tests test. RESULTS: We found that TT genotype (p=0,381) in rs213210 compared with CC genotype (p=0,165) and CC genotype (p=0,823) in rs421446 compared with TT genotype (p=0,537) did not show a significantly increased risk of NSCLC. There is no relationship between polymorphisms in miR-219-1 and the outcome of NSCLC. CONCLUSION: miRNA single nucleotide polymorphisms can be used as genetic biomarkers to predict cancer susceptibility, early diagnosis, and prognosis. Our study has shown that two variants of miR-219-1 were not related to NSCLC in the Turkish population. The reason for this can be differences in ethnicity, regions, and background of population and these differences could lead to various outcomes. Makerere Medical School 2022-12 /pmc/articles/PMC10117453/ /pubmed/37092101 http://dx.doi.org/10.4314/ahs.v22i4.6 Text en © 2022 Tas SK et al. https://creativecommons.org/licenses/by/4.0/Licensee African Health Sciences. This is an Open Access article distributed under the terms of the Creative commons Attribution License (https://creativecommons.org/licenses/BY/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Tas, Sevgi Kalkanli
Coskunpinar, Ender
Yildiz, Pinar
Bayraktaroğlu, Mesut
Kose, Tuba
Altunkanat, Derya
Kirkik, Duygu
Tukenmez, Mustafa
Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients
title Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients
title_full Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients
title_fullStr Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients
title_full_unstemmed Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients
title_short Investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients
title_sort investigation of the effects of mir-219-1 gene variants on the development of disease in non-small cell lung cancer patients
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10117453/
https://www.ncbi.nlm.nih.gov/pubmed/37092101
http://dx.doi.org/10.4314/ahs.v22i4.6
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