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Mechanistic Study of the Conductance and Enhanced Single-Molecule Detection in a Polymer–Electrolyte Nanopore

[Image: see text] Solid-state nanopores have been widely employed in the detection of biomolecules, but low signal-to-noise ratios still represent a major obstacle in the discrimination of nucleic acid and protein sequences substantially smaller than the nanopore diameter. The addition of 50% poly(e...

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Autores principales: Marcuccio, Fabio, Soulias, Dimitrios, Chau, Chalmers C. C., Radford, Sheena E., Hewitt, Eric, Actis, Paolo, Edwards, Martin Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10119975/
https://www.ncbi.nlm.nih.gov/pubmed/37096230
http://dx.doi.org/10.1021/acsnanoscienceau.2c00050
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author Marcuccio, Fabio
Soulias, Dimitrios
Chau, Chalmers C. C.
Radford, Sheena E.
Hewitt, Eric
Actis, Paolo
Edwards, Martin Andrew
author_facet Marcuccio, Fabio
Soulias, Dimitrios
Chau, Chalmers C. C.
Radford, Sheena E.
Hewitt, Eric
Actis, Paolo
Edwards, Martin Andrew
author_sort Marcuccio, Fabio
collection PubMed
description [Image: see text] Solid-state nanopores have been widely employed in the detection of biomolecules, but low signal-to-noise ratios still represent a major obstacle in the discrimination of nucleic acid and protein sequences substantially smaller than the nanopore diameter. The addition of 50% poly(ethylene) glycol (PEG) to the external solution is a simple way to enhance the detection of such biomolecules. Here, we demonstrate with finite-element modeling and experiments that the addition of PEG to the external solution introduces a strong imbalance in the transport properties of cations and anions, drastically affecting the current response of the nanopore. We further show that the strong asymmetric current response is due to a polarity-dependent ion distribution and transport at the nanopipette tip region, leading to either ion depletion or enrichment for few tens of nanometers across its aperture. We provide evidence that a combination of the decreased/increased diffusion coefficients of cations/anions in the bath outside the nanopore and the interaction between a translocating molecule and the nanopore–bath interface is responsible for the increase in the translocation signals. We expect this new mechanism to contribute to further developments in nanopore sensing by suggesting that tuning the diffusion coefficients of ions could enhance the sensitivity of the system.
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spelling pubmed-101199752023-04-22 Mechanistic Study of the Conductance and Enhanced Single-Molecule Detection in a Polymer–Electrolyte Nanopore Marcuccio, Fabio Soulias, Dimitrios Chau, Chalmers C. C. Radford, Sheena E. Hewitt, Eric Actis, Paolo Edwards, Martin Andrew ACS Nanosci Au [Image: see text] Solid-state nanopores have been widely employed in the detection of biomolecules, but low signal-to-noise ratios still represent a major obstacle in the discrimination of nucleic acid and protein sequences substantially smaller than the nanopore diameter. The addition of 50% poly(ethylene) glycol (PEG) to the external solution is a simple way to enhance the detection of such biomolecules. Here, we demonstrate with finite-element modeling and experiments that the addition of PEG to the external solution introduces a strong imbalance in the transport properties of cations and anions, drastically affecting the current response of the nanopore. We further show that the strong asymmetric current response is due to a polarity-dependent ion distribution and transport at the nanopipette tip region, leading to either ion depletion or enrichment for few tens of nanometers across its aperture. We provide evidence that a combination of the decreased/increased diffusion coefficients of cations/anions in the bath outside the nanopore and the interaction between a translocating molecule and the nanopore–bath interface is responsible for the increase in the translocation signals. We expect this new mechanism to contribute to further developments in nanopore sensing by suggesting that tuning the diffusion coefficients of ions could enhance the sensitivity of the system. American Chemical Society 2023-01-10 /pmc/articles/PMC10119975/ /pubmed/37096230 http://dx.doi.org/10.1021/acsnanoscienceau.2c00050 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Marcuccio, Fabio
Soulias, Dimitrios
Chau, Chalmers C. C.
Radford, Sheena E.
Hewitt, Eric
Actis, Paolo
Edwards, Martin Andrew
Mechanistic Study of the Conductance and Enhanced Single-Molecule Detection in a Polymer–Electrolyte Nanopore
title Mechanistic Study of the Conductance and Enhanced Single-Molecule Detection in a Polymer–Electrolyte Nanopore
title_full Mechanistic Study of the Conductance and Enhanced Single-Molecule Detection in a Polymer–Electrolyte Nanopore
title_fullStr Mechanistic Study of the Conductance and Enhanced Single-Molecule Detection in a Polymer–Electrolyte Nanopore
title_full_unstemmed Mechanistic Study of the Conductance and Enhanced Single-Molecule Detection in a Polymer–Electrolyte Nanopore
title_short Mechanistic Study of the Conductance and Enhanced Single-Molecule Detection in a Polymer–Electrolyte Nanopore
title_sort mechanistic study of the conductance and enhanced single-molecule detection in a polymer–electrolyte nanopore
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10119975/
https://www.ncbi.nlm.nih.gov/pubmed/37096230
http://dx.doi.org/10.1021/acsnanoscienceau.2c00050
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