sInterBase: a comprehensive database of Escherichia coli sRNA–mRNA interactions

SUMMARY: sInterBase is a comprehensive and easy-to-operate web-based platform for mining experimentally identified sRNA–mRNA interactions in Escherichia coli. Interactions in the database are annotated with an interaction duplex and a set of descriptive features. sInterBase provides advanced functio...

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Detalles Bibliográficos
Autores principales: Cohen, Shani, Maximof, Eden, Rokach, Shay, Tadeski, Mor, Veksler-Lublinsky, Isana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10121333/
https://www.ncbi.nlm.nih.gov/pubmed/37042720
http://dx.doi.org/10.1093/bioinformatics/btad172
Descripción
Sumario:SUMMARY: sInterBase is a comprehensive and easy-to-operate web-based platform for mining experimentally identified sRNA–mRNA interactions in Escherichia coli. Interactions in the database are annotated with an interaction duplex and a set of descriptive features. sInterBase provides advanced functionality, such as flexible search based on various criteria, statistical analysis via charts, browsing, and downloading interactions for further use. AVAILABILITY AND IMPLEMENTATION: sInterBase is available at https://sinterbase.cs.bgu.ac.il/.

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