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Automated cornea diagnosis using deep convolutional neural networks based on cornea topography maps

Cornea topography maps allow ophthalmologists to screen and diagnose cornea pathologies. We aim to automatically identify any cornea abnormalities based on such cornea topography maps, with focus on diagnosing keratoconus. To do so, we represent the OCT scans as images and apply Convolutional Neural...

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Autores principales: Fassbind, Benjamin, Langenbucher, Achim, Streich, Andreas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10121572/
https://www.ncbi.nlm.nih.gov/pubmed/37085580
http://dx.doi.org/10.1038/s41598-023-33793-w
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author Fassbind, Benjamin
Langenbucher, Achim
Streich, Andreas
author_facet Fassbind, Benjamin
Langenbucher, Achim
Streich, Andreas
author_sort Fassbind, Benjamin
collection PubMed
description Cornea topography maps allow ophthalmologists to screen and diagnose cornea pathologies. We aim to automatically identify any cornea abnormalities based on such cornea topography maps, with focus on diagnosing keratoconus. To do so, we represent the OCT scans as images and apply Convolutional Neural Networks (CNNs) for the automatic analysis. The model is based on a state-of-the-art ConvNeXt CNN architecture with weights fine-tuned for the given specific application using the cornea scans dataset. A set of 1940 consecutive screening scans from the Saarland University Hospital Clinic for Ophthalmology was annotated and used for model training and validation. All scans were recorded with a CASIA2 anterior segment Optical Coherence Tomography (OCT) scanner. The proposed model achieves a sensitivity of 98.46% and a specificity of 91.96% when distinguishing between healthy and pathological corneas. Our approach enables the screening of cornea pathologies and the classification of common pathologies like keratoconus. Furthermore, the approach is independent of the topography scanner and enables the visualization of those scan regions which drive the model’s decisions.
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spelling pubmed-101215722023-04-23 Automated cornea diagnosis using deep convolutional neural networks based on cornea topography maps Fassbind, Benjamin Langenbucher, Achim Streich, Andreas Sci Rep Article Cornea topography maps allow ophthalmologists to screen and diagnose cornea pathologies. We aim to automatically identify any cornea abnormalities based on such cornea topography maps, with focus on diagnosing keratoconus. To do so, we represent the OCT scans as images and apply Convolutional Neural Networks (CNNs) for the automatic analysis. The model is based on a state-of-the-art ConvNeXt CNN architecture with weights fine-tuned for the given specific application using the cornea scans dataset. A set of 1940 consecutive screening scans from the Saarland University Hospital Clinic for Ophthalmology was annotated and used for model training and validation. All scans were recorded with a CASIA2 anterior segment Optical Coherence Tomography (OCT) scanner. The proposed model achieves a sensitivity of 98.46% and a specificity of 91.96% when distinguishing between healthy and pathological corneas. Our approach enables the screening of cornea pathologies and the classification of common pathologies like keratoconus. Furthermore, the approach is independent of the topography scanner and enables the visualization of those scan regions which drive the model’s decisions. Nature Publishing Group UK 2023-04-21 /pmc/articles/PMC10121572/ /pubmed/37085580 http://dx.doi.org/10.1038/s41598-023-33793-w Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Fassbind, Benjamin
Langenbucher, Achim
Streich, Andreas
Automated cornea diagnosis using deep convolutional neural networks based on cornea topography maps
title Automated cornea diagnosis using deep convolutional neural networks based on cornea topography maps
title_full Automated cornea diagnosis using deep convolutional neural networks based on cornea topography maps
title_fullStr Automated cornea diagnosis using deep convolutional neural networks based on cornea topography maps
title_full_unstemmed Automated cornea diagnosis using deep convolutional neural networks based on cornea topography maps
title_short Automated cornea diagnosis using deep convolutional neural networks based on cornea topography maps
title_sort automated cornea diagnosis using deep convolutional neural networks based on cornea topography maps
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10121572/
https://www.ncbi.nlm.nih.gov/pubmed/37085580
http://dx.doi.org/10.1038/s41598-023-33793-w
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