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Enhanced detection of Taylorella equigenitalis by qPCR using ‘Dry’ swabs
Detection of Taylorella equigenitalis (CEMO) in the horse uses genital swabs. These swabs traditionally have been put in Amies charcoal transport medium for detection by culture but are also used for PCR. We determined the suitability of swabs without transport medium (Dry swabs) for CEMO PCR compar...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Japanese Society of Equine Science
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10122987/ https://www.ncbi.nlm.nih.gov/pubmed/37155493 http://dx.doi.org/10.1294/jes.34.7 |
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author | MAWHINNEY, Ian BOLLARD, Anne |
author_facet | MAWHINNEY, Ian BOLLARD, Anne |
author_sort | MAWHINNEY, Ian |
collection | PubMed |
description | Detection of Taylorella equigenitalis (CEMO) in the horse uses genital swabs. These swabs traditionally have been put in Amies charcoal transport medium for detection by culture but are also used for PCR. We determined the suitability of swabs without transport medium (Dry swabs) for CEMO PCR compared to swabs in Amies charcoal transport medium. The experiment was a factorial design using swab type and dilution of organism in culture suspensions, done in two parts. Simulated genital swabs were prepared in the laboratory by dipping in pairs into culture suspensions containing T. equigenitalis with or without other organisms, and then inserting them into a sleeve either with or without transport medium. In study 1, the difference in Ct value for the two swab types was compared. In study 2 genital swab material was then also added to culture suspensions and the swab types again compared. The swabs were tested by a validated quantitative PCR method. The Ct value of the PCR test was used as the measure for comparison, and the effect of variables assessed with linear regression. There was an 7.7% (6.5–8.9) higher mean Ct value of TM versus Dry swabs (P<0.001) overall. The Ct difference was more marked at higher dilutions. Addition of genital swab material had no effect on the Ct value. Dry swabs perform at least as well for PCR as swabs in Amies charcoal transport medium, especially when relatively low numbers of organism are present, and are advantageous for routine sampling when culture is not being used. |
format | Online Article Text |
id | pubmed-10122987 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Japanese Society of Equine Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-101229872023-04-24 Enhanced detection of Taylorella equigenitalis by qPCR using ‘Dry’ swabs MAWHINNEY, Ian BOLLARD, Anne J Equine Sci Full Paper Detection of Taylorella equigenitalis (CEMO) in the horse uses genital swabs. These swabs traditionally have been put in Amies charcoal transport medium for detection by culture but are also used for PCR. We determined the suitability of swabs without transport medium (Dry swabs) for CEMO PCR compared to swabs in Amies charcoal transport medium. The experiment was a factorial design using swab type and dilution of organism in culture suspensions, done in two parts. Simulated genital swabs were prepared in the laboratory by dipping in pairs into culture suspensions containing T. equigenitalis with or without other organisms, and then inserting them into a sleeve either with or without transport medium. In study 1, the difference in Ct value for the two swab types was compared. In study 2 genital swab material was then also added to culture suspensions and the swab types again compared. The swabs were tested by a validated quantitative PCR method. The Ct value of the PCR test was used as the measure for comparison, and the effect of variables assessed with linear regression. There was an 7.7% (6.5–8.9) higher mean Ct value of TM versus Dry swabs (P<0.001) overall. The Ct difference was more marked at higher dilutions. Addition of genital swab material had no effect on the Ct value. Dry swabs perform at least as well for PCR as swabs in Amies charcoal transport medium, especially when relatively low numbers of organism are present, and are advantageous for routine sampling when culture is not being used. The Japanese Society of Equine Science 2023-03-24 2023-03 /pmc/articles/PMC10122987/ /pubmed/37155493 http://dx.doi.org/10.1294/jes.34.7 Text en ©2023 The Japanese Society of Equine Science https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial No Derivatives (by-nc-nd) License. (CC-BY-NC-ND 4.0: https://creativecommons.org/licenses/by-nc-nd/4.0/) |
spellingShingle | Full Paper MAWHINNEY, Ian BOLLARD, Anne Enhanced detection of Taylorella equigenitalis by qPCR using ‘Dry’ swabs |
title | Enhanced detection of Taylorella equigenitalis by qPCR using
‘Dry’ swabs |
title_full | Enhanced detection of Taylorella equigenitalis by qPCR using
‘Dry’ swabs |
title_fullStr | Enhanced detection of Taylorella equigenitalis by qPCR using
‘Dry’ swabs |
title_full_unstemmed | Enhanced detection of Taylorella equigenitalis by qPCR using
‘Dry’ swabs |
title_short | Enhanced detection of Taylorella equigenitalis by qPCR using
‘Dry’ swabs |
title_sort | enhanced detection of taylorella equigenitalis by qpcr using
‘dry’ swabs |
topic | Full Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10122987/ https://www.ncbi.nlm.nih.gov/pubmed/37155493 http://dx.doi.org/10.1294/jes.34.7 |
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