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Experimental and Modeling Studies of Local and Nanoscale para-Cresol Behavior: A Comparison of Classical Force Fields
[Image: see text] The dynamics of bulk liquid para-cresol from 340–390 K was probed using a tandem quasielastic neutron scattering (QENS) and molecular dynamics (MD) approach, due to its relevance as a simple model component of lignin pyrolysis oil. QENS experiments observed both translational jump...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10123653/ https://www.ncbi.nlm.nih.gov/pubmed/37039426 http://dx.doi.org/10.1021/acs.jpca.2c08022 |
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author | Morton, Katie S. C. Elena, Alin M. Armstrong, Jeff O’Malley, Alexander J. |
author_facet | Morton, Katie S. C. Elena, Alin M. Armstrong, Jeff O’Malley, Alexander J. |
author_sort | Morton, Katie S. C. |
collection | PubMed |
description | [Image: see text] The dynamics of bulk liquid para-cresol from 340–390 K was probed using a tandem quasielastic neutron scattering (QENS) and molecular dynamics (MD) approach, due to its relevance as a simple model component of lignin pyrolysis oil. QENS experiments observed both translational jump diffusion and isotropic rotation, with diffusion coefficients ranging from 10.1 to 28.6 × 10(–10) m(2)s(–1) and rotational rates from 5.7 to 9.2 × 10(10) s(–1). The associated activation energies were 22.7 ± 0.6 and 10.1 ± 1.2 kJmol(–1) for the two different dynamics. MD simulations applying two different force field models (OPLS3 and OPLS2005) gave values close to the experimental diffusion coefficients and rotational rates obtained upon calculating the incoherent dynamic structure factor from the simulations over the same time scale probed by the QENS spectrometer. The simulations gave resulting jump diffusion coefficients that were slower by factors of 2.0 and 3.8 and rates of rotation that were slower by factors of 1.2 and 1.6. Comparing the two force field sets, the OPLS3 model showed slower rates of dynamics likely due to a higher molecular polarity, leading to greater quantities and strengths of hydrogen bonding. |
format | Online Article Text |
id | pubmed-10123653 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-101236532023-04-25 Experimental and Modeling Studies of Local and Nanoscale para-Cresol Behavior: A Comparison of Classical Force Fields Morton, Katie S. C. Elena, Alin M. Armstrong, Jeff O’Malley, Alexander J. J Phys Chem A [Image: see text] The dynamics of bulk liquid para-cresol from 340–390 K was probed using a tandem quasielastic neutron scattering (QENS) and molecular dynamics (MD) approach, due to its relevance as a simple model component of lignin pyrolysis oil. QENS experiments observed both translational jump diffusion and isotropic rotation, with diffusion coefficients ranging from 10.1 to 28.6 × 10(–10) m(2)s(–1) and rotational rates from 5.7 to 9.2 × 10(10) s(–1). The associated activation energies were 22.7 ± 0.6 and 10.1 ± 1.2 kJmol(–1) for the two different dynamics. MD simulations applying two different force field models (OPLS3 and OPLS2005) gave values close to the experimental diffusion coefficients and rotational rates obtained upon calculating the incoherent dynamic structure factor from the simulations over the same time scale probed by the QENS spectrometer. The simulations gave resulting jump diffusion coefficients that were slower by factors of 2.0 and 3.8 and rates of rotation that were slower by factors of 1.2 and 1.6. Comparing the two force field sets, the OPLS3 model showed slower rates of dynamics likely due to a higher molecular polarity, leading to greater quantities and strengths of hydrogen bonding. American Chemical Society 2023-04-11 /pmc/articles/PMC10123653/ /pubmed/37039426 http://dx.doi.org/10.1021/acs.jpca.2c08022 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Morton, Katie S. C. Elena, Alin M. Armstrong, Jeff O’Malley, Alexander J. Experimental and Modeling Studies of Local and Nanoscale para-Cresol Behavior: A Comparison of Classical Force Fields |
title | Experimental and
Modeling Studies of Local and Nanoscale para-Cresol
Behavior: A Comparison of Classical Force Fields |
title_full | Experimental and
Modeling Studies of Local and Nanoscale para-Cresol
Behavior: A Comparison of Classical Force Fields |
title_fullStr | Experimental and
Modeling Studies of Local and Nanoscale para-Cresol
Behavior: A Comparison of Classical Force Fields |
title_full_unstemmed | Experimental and
Modeling Studies of Local and Nanoscale para-Cresol
Behavior: A Comparison of Classical Force Fields |
title_short | Experimental and
Modeling Studies of Local and Nanoscale para-Cresol
Behavior: A Comparison of Classical Force Fields |
title_sort | experimental and
modeling studies of local and nanoscale para-cresol
behavior: a comparison of classical force fields |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10123653/ https://www.ncbi.nlm.nih.gov/pubmed/37039426 http://dx.doi.org/10.1021/acs.jpca.2c08022 |
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