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Biology-Informed Recurrent Neural Network for Pandemic Prediction Using Multimodal Data

In the biomedical field, the time interval from infection to medical diagnosis is a random variable that obeys the log-normal distribution in general. Inspired by this biological law, we propose a novel back-projection infected–susceptible–infected-based long short-term memory (BPISI-LSTM) neural ne...

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Detalles Bibliográficos
Autores principales: Ding, Zhiwei, Sha, Feng, Zhang, Yi, Yang, Zhouwang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10123720/
https://www.ncbi.nlm.nih.gov/pubmed/37092410
http://dx.doi.org/10.3390/biomimetics8020158
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author Ding, Zhiwei
Sha, Feng
Zhang, Yi
Yang, Zhouwang
author_facet Ding, Zhiwei
Sha, Feng
Zhang, Yi
Yang, Zhouwang
author_sort Ding, Zhiwei
collection PubMed
description In the biomedical field, the time interval from infection to medical diagnosis is a random variable that obeys the log-normal distribution in general. Inspired by this biological law, we propose a novel back-projection infected–susceptible–infected-based long short-term memory (BPISI-LSTM) neural network for pandemic prediction. The multimodal data, including disease-related data and migration information, are used to model the impact of social contact on disease transmission. The proposed model not only predicts the number of confirmed cases, but also estimates the number of infected cases. We evaluate the proposed model on the COVID-19 datasets from India, Austria, and Indonesia. In terms of predicting the number of confirmed cases, our model outperforms the latest epidemiological modeling methods, such as vSIR, and intelligent algorithms, such as LSTM, for both short-term and long-term predictions, which shows the superiority of bio-inspired intelligent algorithms. In general, the use of mobility information improves the prediction accuracy of the model. Moreover, the number of infected cases in these three countries is also estimated, which is an unobservable but crucial indicator for the control of the pandemic.
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spelling pubmed-101237202023-04-25 Biology-Informed Recurrent Neural Network for Pandemic Prediction Using Multimodal Data Ding, Zhiwei Sha, Feng Zhang, Yi Yang, Zhouwang Biomimetics (Basel) Article In the biomedical field, the time interval from infection to medical diagnosis is a random variable that obeys the log-normal distribution in general. Inspired by this biological law, we propose a novel back-projection infected–susceptible–infected-based long short-term memory (BPISI-LSTM) neural network for pandemic prediction. The multimodal data, including disease-related data and migration information, are used to model the impact of social contact on disease transmission. The proposed model not only predicts the number of confirmed cases, but also estimates the number of infected cases. We evaluate the proposed model on the COVID-19 datasets from India, Austria, and Indonesia. In terms of predicting the number of confirmed cases, our model outperforms the latest epidemiological modeling methods, such as vSIR, and intelligent algorithms, such as LSTM, for both short-term and long-term predictions, which shows the superiority of bio-inspired intelligent algorithms. In general, the use of mobility information improves the prediction accuracy of the model. Moreover, the number of infected cases in these three countries is also estimated, which is an unobservable but crucial indicator for the control of the pandemic. MDPI 2023-04-14 /pmc/articles/PMC10123720/ /pubmed/37092410 http://dx.doi.org/10.3390/biomimetics8020158 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ding, Zhiwei
Sha, Feng
Zhang, Yi
Yang, Zhouwang
Biology-Informed Recurrent Neural Network for Pandemic Prediction Using Multimodal Data
title Biology-Informed Recurrent Neural Network for Pandemic Prediction Using Multimodal Data
title_full Biology-Informed Recurrent Neural Network for Pandemic Prediction Using Multimodal Data
title_fullStr Biology-Informed Recurrent Neural Network for Pandemic Prediction Using Multimodal Data
title_full_unstemmed Biology-Informed Recurrent Neural Network for Pandemic Prediction Using Multimodal Data
title_short Biology-Informed Recurrent Neural Network for Pandemic Prediction Using Multimodal Data
title_sort biology-informed recurrent neural network for pandemic prediction using multimodal data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10123720/
https://www.ncbi.nlm.nih.gov/pubmed/37092410
http://dx.doi.org/10.3390/biomimetics8020158
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