Cargando…

Spatiotemporal Evolution of SARS-CoV-2 Alpha and Delta Variants during Large Nationwide Outbreak of COVID-19, Vietnam, 2021

We analyzed 1,303 SARS-CoV-2 whole-genome sequences from Vietnam, and found the Alpha and Delta variants were responsible for a large nationwide outbreak of COVID-19 in 2021. The Delta variant was confined to the AY.57 lineage and caused >1.7 million infections and >32,000 deaths. Viral transm...

Descripción completa

Detalles Bibliográficos
Autores principales: Tam, Nguyen Thi, Anh, Nguyen To, Tung, Trinh Son, Thach, Pham Ngoc, Dung, Nguyen Thanh, Trang, Van Dinh, Hung, Le Manh, Dien, Trinh Cong, Ngoc, Nghiem My, Van Duyet, Le, Cuong, Phan Manh, Phuong, Hoang Vu Mai, Thai, Pham Quang, Tung, Nguyen Le Nhu, Man, Dinh Nguyen Huy, Phong, Nguyen Thanh, Quang, Vo Minh, Thoa, Pham Thi Ngoc, Truong, Nguyen Thanh, Thao, Tran Nguyen Phuong, Linh, Dao Phuong, Tai, Ngo Tan, Bao, Ho The, Vuong, Vo Trong, Nhung, Huynh Thi Kim, Hong, Phan Nu Dieu, Hanh, Le Thi Phuoc, Chung, Le Thanh, Nhan, Nguyen Thi Thanh, Thanh, Ton That, Hung, Do Thai, Mai, Huynh Kim, Long, Trinh Hoang, Trang, Nguyen Thu, Thuong, Nguyen Thi Hong, Hong, Nguyen Thi Thu, Nhu, Le Nguyen Truc, Ny, Nguyen Thi Han, Thuy, Cao Thu, Thanh, Le Kim, Nguyet, Lam Anh, Mai, Le Thi Quynh, Thuong, Tang Chi, Nga, Le Hong, Thanh, Tran Tan, Thwaites, Guy, Rogier van Doorn, H., Chau, Nguyen Van Vinh, Kesteman, Thomas, Van Tan, Le
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Centers for Disease Control and Prevention 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10124647/
https://www.ncbi.nlm.nih.gov/pubmed/37015283
http://dx.doi.org/10.3201/eid2905.221787
_version_ 1785029881022644224
author Tam, Nguyen Thi
Anh, Nguyen To
Tung, Trinh Son
Thach, Pham Ngoc
Dung, Nguyen Thanh
Trang, Van Dinh
Hung, Le Manh
Dien, Trinh Cong
Ngoc, Nghiem My
Van Duyet, Le
Cuong, Phan Manh
Phuong, Hoang Vu Mai
Thai, Pham Quang
Tung, Nguyen Le Nhu
Man, Dinh Nguyen Huy
Phong, Nguyen Thanh
Quang, Vo Minh
Thoa, Pham Thi Ngoc
Truong, Nguyen Thanh
Thao, Tran Nguyen Phuong
Linh, Dao Phuong
Tai, Ngo Tan
Bao, Ho The
Vuong, Vo Trong
Nhung, Huynh Thi Kim
Hong, Phan Nu Dieu
Hanh, Le Thi Phuoc
Chung, Le Thanh
Nhan, Nguyen Thi Thanh
Thanh, Ton That
Hung, Do Thai
Mai, Huynh Kim
Long, Trinh Hoang
Trang, Nguyen Thu
Thuong, Nguyen Thi Hong
Hong, Nguyen Thi Thu
Nhu, Le Nguyen Truc
Ny, Nguyen Thi Han
Thuy, Cao Thu
Thanh, Le Kim
Nguyet, Lam Anh
Mai, Le Thi Quynh
Thuong, Tang Chi
Nga, Le Hong
Thanh, Tran Tan
Thwaites, Guy
Rogier van Doorn, H.
Chau, Nguyen Van Vinh
Kesteman, Thomas
Van Tan, Le
author_facet Tam, Nguyen Thi
Anh, Nguyen To
Tung, Trinh Son
Thach, Pham Ngoc
Dung, Nguyen Thanh
Trang, Van Dinh
Hung, Le Manh
Dien, Trinh Cong
Ngoc, Nghiem My
Van Duyet, Le
Cuong, Phan Manh
Phuong, Hoang Vu Mai
Thai, Pham Quang
Tung, Nguyen Le Nhu
Man, Dinh Nguyen Huy
Phong, Nguyen Thanh
Quang, Vo Minh
Thoa, Pham Thi Ngoc
Truong, Nguyen Thanh
Thao, Tran Nguyen Phuong
Linh, Dao Phuong
Tai, Ngo Tan
Bao, Ho The
Vuong, Vo Trong
Nhung, Huynh Thi Kim
Hong, Phan Nu Dieu
Hanh, Le Thi Phuoc
Chung, Le Thanh
Nhan, Nguyen Thi Thanh
Thanh, Ton That
Hung, Do Thai
Mai, Huynh Kim
Long, Trinh Hoang
Trang, Nguyen Thu
Thuong, Nguyen Thi Hong
Hong, Nguyen Thi Thu
Nhu, Le Nguyen Truc
Ny, Nguyen Thi Han
Thuy, Cao Thu
Thanh, Le Kim
Nguyet, Lam Anh
Mai, Le Thi Quynh
Thuong, Tang Chi
Nga, Le Hong
Thanh, Tran Tan
Thwaites, Guy
Rogier van Doorn, H.
Chau, Nguyen Van Vinh
Kesteman, Thomas
Van Tan, Le
author_sort Tam, Nguyen Thi
collection PubMed
description We analyzed 1,303 SARS-CoV-2 whole-genome sequences from Vietnam, and found the Alpha and Delta variants were responsible for a large nationwide outbreak of COVID-19 in 2021. The Delta variant was confined to the AY.57 lineage and caused >1.7 million infections and >32,000 deaths. Viral transmission was strongly affected by nonpharmaceutical interventions.
format Online
Article
Text
id pubmed-10124647
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Centers for Disease Control and Prevention
record_format MEDLINE/PubMed
spelling pubmed-101246472023-05-01 Spatiotemporal Evolution of SARS-CoV-2 Alpha and Delta Variants during Large Nationwide Outbreak of COVID-19, Vietnam, 2021 Tam, Nguyen Thi Anh, Nguyen To Tung, Trinh Son Thach, Pham Ngoc Dung, Nguyen Thanh Trang, Van Dinh Hung, Le Manh Dien, Trinh Cong Ngoc, Nghiem My Van Duyet, Le Cuong, Phan Manh Phuong, Hoang Vu Mai Thai, Pham Quang Tung, Nguyen Le Nhu Man, Dinh Nguyen Huy Phong, Nguyen Thanh Quang, Vo Minh Thoa, Pham Thi Ngoc Truong, Nguyen Thanh Thao, Tran Nguyen Phuong Linh, Dao Phuong Tai, Ngo Tan Bao, Ho The Vuong, Vo Trong Nhung, Huynh Thi Kim Hong, Phan Nu Dieu Hanh, Le Thi Phuoc Chung, Le Thanh Nhan, Nguyen Thi Thanh Thanh, Ton That Hung, Do Thai Mai, Huynh Kim Long, Trinh Hoang Trang, Nguyen Thu Thuong, Nguyen Thi Hong Hong, Nguyen Thi Thu Nhu, Le Nguyen Truc Ny, Nguyen Thi Han Thuy, Cao Thu Thanh, Le Kim Nguyet, Lam Anh Mai, Le Thi Quynh Thuong, Tang Chi Nga, Le Hong Thanh, Tran Tan Thwaites, Guy Rogier van Doorn, H. Chau, Nguyen Van Vinh Kesteman, Thomas Van Tan, Le Emerg Infect Dis Dispatch We analyzed 1,303 SARS-CoV-2 whole-genome sequences from Vietnam, and found the Alpha and Delta variants were responsible for a large nationwide outbreak of COVID-19 in 2021. The Delta variant was confined to the AY.57 lineage and caused >1.7 million infections and >32,000 deaths. Viral transmission was strongly affected by nonpharmaceutical interventions. Centers for Disease Control and Prevention 2023-05 /pmc/articles/PMC10124647/ /pubmed/37015283 http://dx.doi.org/10.3201/eid2905.221787 Text en https://creativecommons.org/licenses/by/4.0/Emerging Infectious Diseases is a publication of the U.S. Government. This publication is in the public domain and is therefore without copyright. All text from this work may be reprinted freely. Use of these materials should be properly cited.
spellingShingle Dispatch
Tam, Nguyen Thi
Anh, Nguyen To
Tung, Trinh Son
Thach, Pham Ngoc
Dung, Nguyen Thanh
Trang, Van Dinh
Hung, Le Manh
Dien, Trinh Cong
Ngoc, Nghiem My
Van Duyet, Le
Cuong, Phan Manh
Phuong, Hoang Vu Mai
Thai, Pham Quang
Tung, Nguyen Le Nhu
Man, Dinh Nguyen Huy
Phong, Nguyen Thanh
Quang, Vo Minh
Thoa, Pham Thi Ngoc
Truong, Nguyen Thanh
Thao, Tran Nguyen Phuong
Linh, Dao Phuong
Tai, Ngo Tan
Bao, Ho The
Vuong, Vo Trong
Nhung, Huynh Thi Kim
Hong, Phan Nu Dieu
Hanh, Le Thi Phuoc
Chung, Le Thanh
Nhan, Nguyen Thi Thanh
Thanh, Ton That
Hung, Do Thai
Mai, Huynh Kim
Long, Trinh Hoang
Trang, Nguyen Thu
Thuong, Nguyen Thi Hong
Hong, Nguyen Thi Thu
Nhu, Le Nguyen Truc
Ny, Nguyen Thi Han
Thuy, Cao Thu
Thanh, Le Kim
Nguyet, Lam Anh
Mai, Le Thi Quynh
Thuong, Tang Chi
Nga, Le Hong
Thanh, Tran Tan
Thwaites, Guy
Rogier van Doorn, H.
Chau, Nguyen Van Vinh
Kesteman, Thomas
Van Tan, Le
Spatiotemporal Evolution of SARS-CoV-2 Alpha and Delta Variants during Large Nationwide Outbreak of COVID-19, Vietnam, 2021
title Spatiotemporal Evolution of SARS-CoV-2 Alpha and Delta Variants during Large Nationwide Outbreak of COVID-19, Vietnam, 2021
title_full Spatiotemporal Evolution of SARS-CoV-2 Alpha and Delta Variants during Large Nationwide Outbreak of COVID-19, Vietnam, 2021
title_fullStr Spatiotemporal Evolution of SARS-CoV-2 Alpha and Delta Variants during Large Nationwide Outbreak of COVID-19, Vietnam, 2021
title_full_unstemmed Spatiotemporal Evolution of SARS-CoV-2 Alpha and Delta Variants during Large Nationwide Outbreak of COVID-19, Vietnam, 2021
title_short Spatiotemporal Evolution of SARS-CoV-2 Alpha and Delta Variants during Large Nationwide Outbreak of COVID-19, Vietnam, 2021
title_sort spatiotemporal evolution of sars-cov-2 alpha and delta variants during large nationwide outbreak of covid-19, vietnam, 2021
topic Dispatch
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10124647/
https://www.ncbi.nlm.nih.gov/pubmed/37015283
http://dx.doi.org/10.3201/eid2905.221787
work_keys_str_mv AT tamnguyenthi spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT anhnguyento spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT tungtrinhson spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT thachphamngoc spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT dungnguyenthanh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT trangvandinh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT hunglemanh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT dientrinhcong spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT ngocnghiemmy spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT vanduyetle spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT cuongphanmanh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT phuonghoangvumai spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT thaiphamquang spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT tungnguyenlenhu spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT mandinhnguyenhuy spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT phongnguyenthanh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT quangvominh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT thoaphamthingoc spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT truongnguyenthanh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT thaotrannguyenphuong spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT linhdaophuong spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT taingotan spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT baohothe spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT vuongvotrong spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT nhunghuynhthikim spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT hongphannudieu spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT hanhlethiphuoc spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT chunglethanh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT nhannguyenthithanh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT thanhtonthat spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT hungdothai spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT maihuynhkim spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT longtrinhhoang spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT trangnguyenthu spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT thuongnguyenthihong spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT hongnguyenthithu spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT nhulenguyentruc spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT nynguyenthihan spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT thuycaothu spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT thanhlekim spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT nguyetlamanh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT mailethiquynh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT thuongtangchi spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT ngalehong spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT thanhtrantan spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT thwaitesguy spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT rogiervandoornh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT chaunguyenvanvinh spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT kestemanthomas spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT vantanle spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021
AT spatiotemporalevolutionofsarscov2alphaanddeltavariantsduringlargenationwideoutbreakofcovid19vietnam2021