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The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm
BACKGROUND: This study aimed to develop and validate predictive models based on machine learning (ML) algorithms for patients with bone metastases (BM) from clear cell renal cell carcinoma (ccRCC) and to identify appropriate models for clinical decision-making. METHODS: In this retrospective study,...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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SAGE Publications
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10126632/ https://www.ncbi.nlm.nih.gov/pubmed/37078130 http://dx.doi.org/10.1177/15330338231165131 |
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author | Le, Yijun Xu, Wen Guo, Wei |
author_facet | Le, Yijun Xu, Wen Guo, Wei |
author_sort | Le, Yijun |
collection | PubMed |
description | BACKGROUND: This study aimed to develop and validate predictive models based on machine learning (ML) algorithms for patients with bone metastases (BM) from clear cell renal cell carcinoma (ccRCC) and to identify appropriate models for clinical decision-making. METHODS: In this retrospective study, we obtained information on ccRCC patients diagnosed with bone metastasis (ccRCC-BM), from the Surveillance, Epidemiology, and End Results (SEER) database from 2010 to 2015 (n = 1490), and collected clinicopathological information on ccRCC-BM patients at our hospital (n = 42). We then applied four ML algorithms: extreme gradient boosting (XGB), logistic regression (LR), random forest (RF), and Naive Bayes model (NB), to develop models for predicting the overall survival (OS) of patients with bone metastasis from ccRCC. In the SEER dataset, 70% of the patients were randomly divided into training cohorts and the remaining 30% were used as validation cohorts. Data from our center were used as an external validation cohort. Finally, we evaluated the model performance using receiver operating characteristic curves (ROC), area under the ROC curve (AUC), accuracy, specificity, and F1-scores. RESULTS: The mean survival times of patients in the SEER and Chinese cohort were 21.8 months and 37.0 months, respectively. Age, marital status, grade, T stage, N stage, tumor size, brain metastasis, liver metastasis, lung metastasis, and surgery were included in the ML model. We observed that all four ML algorithms performed well in predicting the 1-year and 3-year OS of patients with ccRCC-BM. CONCLUSION: ML is useful in predicting the survival of patients with ccRCC-BM, and ML models can play a positive role in clinical applications. |
format | Online Article Text |
id | pubmed-10126632 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-101266322023-04-26 The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm Le, Yijun Xu, Wen Guo, Wei Technol Cancer Res Treat Challenges in the application of machine learning in cancers BACKGROUND: This study aimed to develop and validate predictive models based on machine learning (ML) algorithms for patients with bone metastases (BM) from clear cell renal cell carcinoma (ccRCC) and to identify appropriate models for clinical decision-making. METHODS: In this retrospective study, we obtained information on ccRCC patients diagnosed with bone metastasis (ccRCC-BM), from the Surveillance, Epidemiology, and End Results (SEER) database from 2010 to 2015 (n = 1490), and collected clinicopathological information on ccRCC-BM patients at our hospital (n = 42). We then applied four ML algorithms: extreme gradient boosting (XGB), logistic regression (LR), random forest (RF), and Naive Bayes model (NB), to develop models for predicting the overall survival (OS) of patients with bone metastasis from ccRCC. In the SEER dataset, 70% of the patients were randomly divided into training cohorts and the remaining 30% were used as validation cohorts. Data from our center were used as an external validation cohort. Finally, we evaluated the model performance using receiver operating characteristic curves (ROC), area under the ROC curve (AUC), accuracy, specificity, and F1-scores. RESULTS: The mean survival times of patients in the SEER and Chinese cohort were 21.8 months and 37.0 months, respectively. Age, marital status, grade, T stage, N stage, tumor size, brain metastasis, liver metastasis, lung metastasis, and surgery were included in the ML model. We observed that all four ML algorithms performed well in predicting the 1-year and 3-year OS of patients with ccRCC-BM. CONCLUSION: ML is useful in predicting the survival of patients with ccRCC-BM, and ML models can play a positive role in clinical applications. SAGE Publications 2023-04-19 /pmc/articles/PMC10126632/ /pubmed/37078130 http://dx.doi.org/10.1177/15330338231165131 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Challenges in the application of machine learning in cancers Le, Yijun Xu, Wen Guo, Wei The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm |
title | The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm |
title_full | The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm |
title_fullStr | The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm |
title_full_unstemmed | The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm |
title_short | The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm |
title_sort | construction and validation of a new predictive model for overall survival of clear cell renal cell carcinoma patients with bone metastasis based on machine learning algorithm |
topic | Challenges in the application of machine learning in cancers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10126632/ https://www.ncbi.nlm.nih.gov/pubmed/37078130 http://dx.doi.org/10.1177/15330338231165131 |
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