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The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm

BACKGROUND: This study aimed to develop and validate predictive models based on machine learning (ML) algorithms for patients with bone metastases (BM) from clear cell renal cell carcinoma (ccRCC) and to identify appropriate models for clinical decision-making. METHODS: In this retrospective study,...

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Autores principales: Le, Yijun, Xu, Wen, Guo, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10126632/
https://www.ncbi.nlm.nih.gov/pubmed/37078130
http://dx.doi.org/10.1177/15330338231165131
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author Le, Yijun
Xu, Wen
Guo, Wei
author_facet Le, Yijun
Xu, Wen
Guo, Wei
author_sort Le, Yijun
collection PubMed
description BACKGROUND: This study aimed to develop and validate predictive models based on machine learning (ML) algorithms for patients with bone metastases (BM) from clear cell renal cell carcinoma (ccRCC) and to identify appropriate models for clinical decision-making. METHODS: In this retrospective study, we obtained information on ccRCC patients diagnosed with bone metastasis (ccRCC-BM), from the Surveillance, Epidemiology, and End Results (SEER) database from 2010 to 2015 (n = 1490), and collected clinicopathological information on ccRCC-BM patients at our hospital (n = 42). We then applied four ML algorithms: extreme gradient boosting (XGB), logistic regression (LR), random forest (RF), and Naive Bayes model (NB), to develop models for predicting the overall survival (OS) of patients with bone metastasis from ccRCC. In the SEER dataset, 70% of the patients were randomly divided into training cohorts and the remaining 30% were used as validation cohorts. Data from our center were used as an external validation cohort. Finally, we evaluated the model performance using receiver operating characteristic curves (ROC), area under the ROC curve (AUC), accuracy, specificity, and F1-scores. RESULTS: The mean survival times of patients in the SEER and Chinese cohort were 21.8 months and 37.0 months, respectively. Age, marital status, grade, T stage, N stage, tumor size, brain metastasis, liver metastasis, lung metastasis, and surgery were included in the ML model. We observed that all four ML algorithms performed well in predicting the 1-year and 3-year OS of patients with ccRCC-BM. CONCLUSION: ML is useful in predicting the survival of patients with ccRCC-BM, and ML models can play a positive role in clinical applications.
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spelling pubmed-101266322023-04-26 The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm Le, Yijun Xu, Wen Guo, Wei Technol Cancer Res Treat Challenges in the application of machine learning in cancers BACKGROUND: This study aimed to develop and validate predictive models based on machine learning (ML) algorithms for patients with bone metastases (BM) from clear cell renal cell carcinoma (ccRCC) and to identify appropriate models for clinical decision-making. METHODS: In this retrospective study, we obtained information on ccRCC patients diagnosed with bone metastasis (ccRCC-BM), from the Surveillance, Epidemiology, and End Results (SEER) database from 2010 to 2015 (n = 1490), and collected clinicopathological information on ccRCC-BM patients at our hospital (n = 42). We then applied four ML algorithms: extreme gradient boosting (XGB), logistic regression (LR), random forest (RF), and Naive Bayes model (NB), to develop models for predicting the overall survival (OS) of patients with bone metastasis from ccRCC. In the SEER dataset, 70% of the patients were randomly divided into training cohorts and the remaining 30% were used as validation cohorts. Data from our center were used as an external validation cohort. Finally, we evaluated the model performance using receiver operating characteristic curves (ROC), area under the ROC curve (AUC), accuracy, specificity, and F1-scores. RESULTS: The mean survival times of patients in the SEER and Chinese cohort were 21.8 months and 37.0 months, respectively. Age, marital status, grade, T stage, N stage, tumor size, brain metastasis, liver metastasis, lung metastasis, and surgery were included in the ML model. We observed that all four ML algorithms performed well in predicting the 1-year and 3-year OS of patients with ccRCC-BM. CONCLUSION: ML is useful in predicting the survival of patients with ccRCC-BM, and ML models can play a positive role in clinical applications. SAGE Publications 2023-04-19 /pmc/articles/PMC10126632/ /pubmed/37078130 http://dx.doi.org/10.1177/15330338231165131 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Challenges in the application of machine learning in cancers
Le, Yijun
Xu, Wen
Guo, Wei
The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm
title The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm
title_full The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm
title_fullStr The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm
title_full_unstemmed The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm
title_short The Construction and Validation of a new Predictive Model for Overall Survival of Clear Cell Renal Cell Carcinoma Patients with Bone Metastasis Based on Machine Learning Algorithm
title_sort construction and validation of a new predictive model for overall survival of clear cell renal cell carcinoma patients with bone metastasis based on machine learning algorithm
topic Challenges in the application of machine learning in cancers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10126632/
https://www.ncbi.nlm.nih.gov/pubmed/37078130
http://dx.doi.org/10.1177/15330338231165131
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