Cargando…

Data on cloning, expression and biochemical characteristics of a chondroitin sulfate/dermatan sulfate 4-O-endosulfatase

The data shown in this article are related to the published paper entitled “A novel 4-O-endosulfatase with high potential for the structure-function studies of chondroitin sulfate/dermatan sulfate” in Carbohydrate Polymers. In this article, the phylogenetic analysis, cloning, expression, purificatio...

Descripción completa

Detalles Bibliográficos
Autores principales: Wei, Lin, Xu, Yingying, Du, Min, Fan, Ying, Zou, Ruyi, Xu, Xiangyu, Zhang, Qingdong, Zhang, Yu-Zhong, Wang, Wenshuang, Li, Fuchuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10126848/
https://www.ncbi.nlm.nih.gov/pubmed/37113498
http://dx.doi.org/10.1016/j.dib.2023.109139
_version_ 1785030347959828480
author Wei, Lin
Xu, Yingying
Du, Min
Fan, Ying
Zou, Ruyi
Xu, Xiangyu
Zhang, Qingdong
Zhang, Yu-Zhong
Wang, Wenshuang
Li, Fuchuan
author_facet Wei, Lin
Xu, Yingying
Du, Min
Fan, Ying
Zou, Ruyi
Xu, Xiangyu
Zhang, Qingdong
Zhang, Yu-Zhong
Wang, Wenshuang
Li, Fuchuan
author_sort Wei, Lin
collection PubMed
description The data shown in this article are related to the published paper entitled “A novel 4-O-endosulfatase with high potential for the structure-function studies of chondroitin sulfate/dermatan sulfate” in Carbohydrate Polymers. In this article, the phylogenetic analysis, cloning, expression, purification, specificity and biochemical characteristics of the identified chondroitin sulfate/dermatan sulfate 4-O-endosulfatase (endoBI4SF) are described in detail. The recombinant endoBI4SF with a molecular mass of 59.13 kDa can can specifically hydrolyze the 4-O- but not 2-O- and 6-O-sulfate groups in the oligo-/polysaccharides of chondroitin sulfate/dermatan sulfate and show the maximum reaction rate in 50 mM Tris-HCl buffer (pH 7.0) at 50°C, which can be a very useful tool for the structural and functional studies of chondroitin sulfate/dermatan sulfate.
format Online
Article
Text
id pubmed-10126848
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-101268482023-04-26 Data on cloning, expression and biochemical characteristics of a chondroitin sulfate/dermatan sulfate 4-O-endosulfatase Wei, Lin Xu, Yingying Du, Min Fan, Ying Zou, Ruyi Xu, Xiangyu Zhang, Qingdong Zhang, Yu-Zhong Wang, Wenshuang Li, Fuchuan Data Brief Data Article The data shown in this article are related to the published paper entitled “A novel 4-O-endosulfatase with high potential for the structure-function studies of chondroitin sulfate/dermatan sulfate” in Carbohydrate Polymers. In this article, the phylogenetic analysis, cloning, expression, purification, specificity and biochemical characteristics of the identified chondroitin sulfate/dermatan sulfate 4-O-endosulfatase (endoBI4SF) are described in detail. The recombinant endoBI4SF with a molecular mass of 59.13 kDa can can specifically hydrolyze the 4-O- but not 2-O- and 6-O-sulfate groups in the oligo-/polysaccharides of chondroitin sulfate/dermatan sulfate and show the maximum reaction rate in 50 mM Tris-HCl buffer (pH 7.0) at 50°C, which can be a very useful tool for the structural and functional studies of chondroitin sulfate/dermatan sulfate. Elsevier 2023-04-10 /pmc/articles/PMC10126848/ /pubmed/37113498 http://dx.doi.org/10.1016/j.dib.2023.109139 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Wei, Lin
Xu, Yingying
Du, Min
Fan, Ying
Zou, Ruyi
Xu, Xiangyu
Zhang, Qingdong
Zhang, Yu-Zhong
Wang, Wenshuang
Li, Fuchuan
Data on cloning, expression and biochemical characteristics of a chondroitin sulfate/dermatan sulfate 4-O-endosulfatase
title Data on cloning, expression and biochemical characteristics of a chondroitin sulfate/dermatan sulfate 4-O-endosulfatase
title_full Data on cloning, expression and biochemical characteristics of a chondroitin sulfate/dermatan sulfate 4-O-endosulfatase
title_fullStr Data on cloning, expression and biochemical characteristics of a chondroitin sulfate/dermatan sulfate 4-O-endosulfatase
title_full_unstemmed Data on cloning, expression and biochemical characteristics of a chondroitin sulfate/dermatan sulfate 4-O-endosulfatase
title_short Data on cloning, expression and biochemical characteristics of a chondroitin sulfate/dermatan sulfate 4-O-endosulfatase
title_sort data on cloning, expression and biochemical characteristics of a chondroitin sulfate/dermatan sulfate 4-o-endosulfatase
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10126848/
https://www.ncbi.nlm.nih.gov/pubmed/37113498
http://dx.doi.org/10.1016/j.dib.2023.109139
work_keys_str_mv AT weilin dataoncloningexpressionandbiochemicalcharacteristicsofachondroitinsulfatedermatansulfate4oendosulfatase
AT xuyingying dataoncloningexpressionandbiochemicalcharacteristicsofachondroitinsulfatedermatansulfate4oendosulfatase
AT dumin dataoncloningexpressionandbiochemicalcharacteristicsofachondroitinsulfatedermatansulfate4oendosulfatase
AT fanying dataoncloningexpressionandbiochemicalcharacteristicsofachondroitinsulfatedermatansulfate4oendosulfatase
AT zouruyi dataoncloningexpressionandbiochemicalcharacteristicsofachondroitinsulfatedermatansulfate4oendosulfatase
AT xuxiangyu dataoncloningexpressionandbiochemicalcharacteristicsofachondroitinsulfatedermatansulfate4oendosulfatase
AT zhangqingdong dataoncloningexpressionandbiochemicalcharacteristicsofachondroitinsulfatedermatansulfate4oendosulfatase
AT zhangyuzhong dataoncloningexpressionandbiochemicalcharacteristicsofachondroitinsulfatedermatansulfate4oendosulfatase
AT wangwenshuang dataoncloningexpressionandbiochemicalcharacteristicsofachondroitinsulfatedermatansulfate4oendosulfatase
AT lifuchuan dataoncloningexpressionandbiochemicalcharacteristicsofachondroitinsulfatedermatansulfate4oendosulfatase