Cargando…
Evaluation of various distance computation methods for construction of haplotype-based phylogenies from large MLST datasets
Multi-locus sequence typing (MLST) is widely used to investigate genetic relationships among eukaryotic taxa, including parasitic pathogens. MLST analysis workflows typically involve construction of alignment-based phylogenetic trees – i.e., where tree structures are computed from nucleotide differe...
Autores principales: | Jacobson, David, Zheng, Yueli, Plucinski, Mateusz M., Qvarnstrom, Yvonne, Barratt, Joel L. N. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10127246/ https://www.ncbi.nlm.nih.gov/pubmed/35963590 http://dx.doi.org/10.1016/j.ympev.2022.107608 |
Ejemplares similares
-
Evaluation of an ensemble-based distance statistic for clustering MLST datasets using epidemiologically defined clusters of cyclosporiasis
por: Nascimento, Fernanda S., et al.
Publicado: (2020) -
MentaLiST – A fast MLST caller for large MLST schemes
por: Feijao, Pedro, et al.
Publicado: (2018) -
Retrospective evaluation of an integrated molecular-epidemiological approach to cyclosporiasis outbreak investigations – United States, 2021
por: Ahart, Lauren, et al.
Publicado: (2023) -
Novel insights on the genetic population structure of human-infecting Cyclospora spp. and evidence for rapid subtype selection among isolates from the USA
por: Jacobson, David K., et al.
Publicado: (2023) -
Unveiling the Multilocus Sequence Typing (MLST) Schemes and Core Genome Phylogenies for Genotyping Chlamydia trachomatis
por: Patiño, Luz H., et al.
Publicado: (2018)